RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TRIM49D1C9J1S8 452 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 MEN1O00255 615 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 HCRTR1O43613 425 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 DLGAP3O95886 979 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ALDOAP04075 364 aaKnown RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 EIF2S1P05198 315 aaKnown RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 COL6A2P12110 1019 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 NCF1P14598 390 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 TFEBP19484 476 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 TCN2P20062 427 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 AGXTP21549 392 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ALAS2P22557 587 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 GRK3P35626 688 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 KCNC1P48547 511 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ARSFP54793 590 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 GRM7Q14831 915 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ZXDCQ2QGD7 858 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 DEFB110Q30KQ9 67 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PTCHD3Q3KNS1 767 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 WASHC2DQ5SRD0 308 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PRAMEF17Q5VTA0 474 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 EMBQ6PCB8 327 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 CCDC81Q6ZN84 652 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PRICKLE2Q7Z3G6 844 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PAQR7Q86WK9 346 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ZNF655Q8N720 491 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 RHEBL1Q8TAI7 183 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 KCTD4Q8WVF5 259 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 RHBDF1Q96CC6 855 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 CABS1Q96KC9 395 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 TSNARE1Q96NA8 513 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ZFYVE21Q9BQ24 234 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 SELENOSQ9BQE4 189 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 NDC1Q9BTX1 674 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 DHRS4Q9BTZ2 278 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 CAPS2Q9BXY5 557 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 ALG9Q9H6U8 611 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 CNOT10Q9H9A5 744 aaKnown RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PPCSQ9HAB8 311 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 LHX9Q9NQ69 397 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 IGSF5Q9NSI5 407 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 SLC22A14Q9Y267 594 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 DYRK1BQ9Y463 629 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 V9GYY5 206 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-225ENST00000551845 PTPRQQ9UMZ3 2332 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 MYO18BQ8IUG5 2567 aa10.18□□□□□ -0.78
PTCH1-225ENST00000551845 IGKV1-8A0A0C4DH67 115 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 SYCE1LA8MT33 242 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 TXNDC9O14530 226 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 MAP2K7O14733 419 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 ZSCAN9O15535 394 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 CTSVO60911 334 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 H2AFYO75367 372 aaKnown RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 STK16O75716 305 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 RBP1P09455 135 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 GGT5P36269 586 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 CSRP3P50461 194 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 CCR8P51685 355 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 VSX2P58304 361 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 DLG1Q12959 904 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 OR4D1Q15615 310 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 YOD1Q5VVQ6 348 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 ZNF425Q6IV72 752 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 THOC6Q86W42 341 aaKnown RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 TBC1D19Q8N5T2 526 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 TTC29Q8NA56 475 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 SLC38A9Q8NBW4 561 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 MR1Q95460 341 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 ISL2Q96A47 359 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 RERGQ96A58 199 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 PTERQ96BW5 349 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 RNF31Q96EP0 1072 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 DPH2Q9BQC3 489 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 EPB41L4BQ9H329 900 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 GPN2Q9H9Y4 310 aaPredicted RBP10.17□□□□□ -0.78
PTCH1-225ENST00000551845 SLC6A20Q9NP91 592 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 TXLNGQ9NUQ3 528 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 WWOXQ9NZC7 414 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 KCND3Q9UK17 655 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 SRPK3Q9UPE1 567 aa10.17□□□□□ -0.78
PTCH1-225ENST00000551845 KCNE1BA0A087WTH5 132 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 LOC105369274A0A096LPK9 316 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 LOC102723532A0A0G2JNH3 316 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 LOC101059948A0A1B0GTJ6 334 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 HYKKA2RU49 373 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 H0YGG7 62 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 H3BMH7 237 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 TAPBPO15533 448 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 EFSO43281 561 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 KERAO60938 352 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 IPO13O94829 963 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 WDR47O94967 919 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 CD63P08962 238 aa10.16□□□□□ -0.78
PTCH1-225ENST00000551845 PIM1P11309 404 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 EZRP15311 586 aaKnown RBP10.16□□□□□ -0.78
PTCH1-225ENST00000551845 GNAZP19086 355 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms