RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 GRK3P35626 688 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC26A3P40879 764 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 AVPR1BP47901 424 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 GLRBP48167 497 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 EMP2P54851 167 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 RPS15AP62244 130 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 SPANXN3Q5MJ09 141 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 RNASEH2BQ5TBB1 312 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ATG9BQ674R7 924 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ISLR2Q6UXK2 745 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 UBE2R2Q712K3 238 aaPredicted RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ADCK2Q7Z695 626 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 GALNT7Q86SF2 657 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 PARP9Q8IXQ6 854 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 KBTBD2Q8IY47 623 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 PDIK1LQ8N165 341 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 CISD2Q8N5K1 135 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 C2CD4AQ8NCU7 369 aaPredicted RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 DNAJB14Q8TBM8 379 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 CD200R1Q8TD46 325 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 SSC4DQ8WTU2 575 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 MMABQ96EY8 250 aaPredicted RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 THOC3Q96J01 351 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 GPR21Q99679 349 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 AARSD1Q9BTE6 412 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 YIPF2Q9BWQ6 316 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 DRC3Q9H069 523 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 PARVBQ9HBI1 364 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 CCDC177Q9NQR7 707 aaPredicted RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 IARS2Q9NSE4 1012 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 TRPC4Q9UBN4 977 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 ASIC3Q9UHC3 531 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 PCYOX1Q9UHG3 505 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 TSR3Q9UJK0 312 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 RUVBL1Q9Y265 456 aaKnown RBP10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 MED16Q9Y2X0 877 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 NAV2Q8IVL1 2488 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 MAST4O15021 2626 aa10.36□□□□□ -0.75
VTI1BP3-201ENST00000550220 NSG1A0A0A6YYJ2 146 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 IGKV1-8A0A0C4DH67 115 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 A0A1W2PQ72 361 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 BLACEA4D250 179 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 H0YIG0 161 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 DNALI1O14645 258 aaPredicted RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CBX6O95503 412 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 HEXBP07686 556 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 TSFMP43897 325 aaKnown RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 UQCRFS1P47985 274 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 ILF2Q12905 390 aaKnown RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CUL1Q13616 776 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CRYMQ14894 314 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 VWA2Q5GFL6 755 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CRB2Q5IJ48 1285 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 RPUSD3Q6P087 351 aaKnown RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 RIPOR1Q6ZS17 1223 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 SHISA6Q6ZSJ9 500 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CNTN4Q8IWV2 1026 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 LRRC56Q8IYG6 542 aaPredicted RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 MYO1HQ8N1T3 1032 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC35F6Q8N357 371 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 METTL27Q8N6F8 245 aaPredicted RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 GIMAP7Q8NHV1 300 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 PRR7Q8TB68 274 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 LRRC39Q96DD0 335 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 C10orf90Q96M02 699 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 SLC30A3Q99726 388 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 BARD1Q99728 777 aaKnown RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 TRIM56Q9BRZ2 755 aaKnown RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 TRIM54Q9BYV2 358 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 RIC8BQ9NVN3 520 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 ASF1BQ9NVP2 202 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 LUZP4Q9P127 313 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 CORO1CQ9ULV4 474 aaPredicted RBP10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 PCDHGA10Q9Y5H3 936 aa10.35□□□□□ -0.75
VTI1BP3-201ENST00000550220 ESPL1Q14674 2120 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 RELNP78509 3460 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 ANKRD12Q6UB98 2062 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 DYTNA2CJ06 578 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 KRT87PA6NCN2 255 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 ANKUB1A6NFN9 424 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 IDSB3KWA1 339 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 H7BY64 318 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 NDC80O14777 642 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 BMP10O95393 424 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 SERPINA7P05543 415 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 IMPA1P29218 277 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 AP1S2P56377 157 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 FOXL2P58012 376 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 IL2P60568 153 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 SKP1P63208 163 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 YBX1P67809 324 aaKnown RBP10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 MFAP5Q13361 173 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 ZNF169Q14929 603 aaPredicted RBP10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 MORF4L2Q15014 288 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 EIF2S3LQ2VIR3 472 aaKnown RBP10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 CAPN13Q6MZZ7 669 aaPredicted RBP10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 NIPAL1Q6NVV3 410 aa10.34□□□□□ -0.75
VTI1BP3-201ENST00000550220 CUZD1Q86UP6 607 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms