RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TADA1Q96BN2 335 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 L3HYPDHQ96EM0 354 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 VMP1Q96GC9 406 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ADAP2Q9NPF8 381 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ITM2CQ9NQX7 267 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 NT5EP21589 574 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 HLA-FP30511 346 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 PDCD4Q53EL6 469 aaKnown RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 CLEC14AQ86T13 490 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 MYDGFQ969H8 173 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ZNF514Q96K75 400 aaPredicted RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 ATOH8Q96SQ7 321 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 SLC29A3Q9BZD2 475 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 EHD3Q9NZN3 535 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 OARD1Q9Y530 152 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 N6AMT1Q9Y5N5 214 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 TAF1LQ8IZX4 1826 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 A0A1W2PP55 124 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 DYRK3O43781 588 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SLC16A8O95907 504 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CARTPTQ16568 116 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 IFI44LQ53G44 452 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 GALNT18Q6P9A2 607 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 KLHDC10Q6PID8 442 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CNTN4Q8IWV2 1026 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SCML4Q8N228 414 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 MUS81Q96NY9 551 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SLC29A1Q99808 456 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CHCHD6Q9BRQ6 235 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 C3orf14Q9HBI5 128 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 KRCC1Q9NPI7 259 aaPredicted RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 CMTM6Q9NX76 183 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 A0A0J9YVX5 310 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 LINGO3P0C6S8 592 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 ILF3Q12906 894 aaKnown RBP eCLIP14.55□□□□□ -0.084e-7■■■■□ 21.7
CUX1-214ENST00000550008 MTAPQ13126 283 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 GRIN2CQ14957 1233 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CMTR2Q8IYT2 770 aaKnown RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 RNFT2Q96EX2 444 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SIPA1Q96FS4 1042 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 HIDE1A8MVS5 230 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 UGT2B11O75310 529 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 ALDOCP09972 364 aaKnown RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 CBSLP0DN79 551 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CBSP35520 551 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 PTSQ03393 145 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 DPY19L1Q2PZI1 675 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 ANKLE1Q8NAG6 615 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 OR4E2Q8NGC2 313 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 DOK4Q8TEW6 326 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 TOR3AQ9H497 397 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 NUP214P35658 2090 aaPredicted RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 DOCK3Q8IZD9 2030 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 EDDM13A0A1B0GTR0 161 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 PRSS51A0A1B0GVH4 220 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 PDPK1O15530 556 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 NDUFS2O75306 463 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 PDE9AO76083 593 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 GADD45GO95257 159 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 BMP10O95393 424 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 IFNGR2P38484 337 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SCARB2Q14108 478 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 CLECL1Q8IZS7 167 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 OR5K1Q8NHB7 308 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 EZH1Q92800 747 aaPredicted RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 GORASP1Q9BQQ3 440 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 SRMSQ9H3Y6 488 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 ACSL6Q9UKU0 697 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 RWDD3Q9Y3V2 267 aa14.55□□□□□ -0.08
CUX1-214ENST00000550008 OAS3Q9Y6K5 1087 aaKnown RBP14.55□□□□□ -0.08
CUX1-214ENST00000550008 ELK4P28324 431 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 RGS8P57771 180 aaPredicted RBP14.54□□□□□ -0.08
CUX1-214ENST00000550008 DUOXA1Q1HG43 343 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 KANK2Q63ZY3 851 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 OR2T5Q6IEZ7 315 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 POMZP3Q6PJE2 187 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 GAREM2Q75VX8 874 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 AMER2Q8N7J2 671 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 OR2T29Q8NH02 315 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 NFKBIDQ8NI38 313 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 SPATA5L1Q9BVQ7 753 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 MRPS30Q9NP92 439 aaKnown RBP14.54□□□□□ -0.08
CUX1-214ENST00000550008 LRRC72A6NJI9 287 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 SOCS2O14508 198 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 BCHEP06276 602 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 RB1P06400 928 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 SEPHS1P49903 392 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 NFE2L1Q14494 772 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 HLA-DQA1Q5Y7H0 255 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 CWF19L1Q69YN2 538 aaKnown RBP14.54□□□□□ -0.08
CUX1-214ENST00000550008 CLIP4Q8N3C7 705 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 TP53INP1Q96A56 240 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 HSH2DQ96JZ2 352 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 ZNF282Q9UDV7 671 aaPredicted RBP14.54□□□□□ -0.08
CUX1-214ENST00000550008 HEPACAM2A8MVW5 462 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 PSMD11O00231 422 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 ADAMDEC1O15204 470 aa14.54□□□□□ -0.08
CUX1-214ENST00000550008 ARRB2P32121 409 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms