RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 ADGRL3Q9HAR2 1447 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 C1orf167Q5SNV9 1468 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 RPRD2Q5VT52 1461 aaKnown RBP3.83□□□□□ -1.8
SNHG1-224ENST00000545688 RALGAPBQ86X10 1494 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 TRPM2O94759 1503 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 UNC13BO14795 1591 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 GLI3P10071 1580 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 COL22A1Q8NFW1 1626 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-224ENST00000545688 CFAP65Q6ZU64 1925 aaKnown RBP3.83□□□□□ -1.8
SNHG1-224ENST00000545688 SPHKAPQ2M3C7 1700 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 TMEM131LA2VDJ0 1609 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 ABCC5O15440 1437 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 KIF15Q9NS87 1388 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 PI4K2BG5E9Z4 385 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 MEIS2O14770 477 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 TOMM70O94826 608 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 TRUB2O95900 331 aaKnown RBP3.82□□□□□ -1.8
SNHG1-224ENST00000545688 IGHEP01854 428 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 GCH1P30793 250 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
SNHG1-224ENST00000545688 CREB5Q02930 508 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 PEX6Q13608 980 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 MTF1Q14872 753 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 SLC35D3Q5M8T2 416 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 SLC25A30Q5SVS4 291 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 C17orf53Q8N3J3 647 aaPredicted RBP3.82□□□□□ -1.8
SNHG1-224ENST00000545688 POC5Q8NA72 575 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 C17orf47Q8NEP4 570 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 EXD1Q8NHP7 514 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 MAN1B1Q9UKM7 699 aa3.82□□□□□ -1.8
SNHG1-224ENST00000545688 XRN1Q8IZH2 1706 aaKnown RBP3.81□□□□□ -1.8
SNHG1-224ENST00000545688 MYOM3Q5VTT5 1437 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 GOLGB1Q14789 3259 aaKnown RBP3.81□□□□□ -1.8
SNHG1-224ENST00000545688 METP08581 1390 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 LOC102723996A0A087X1L8 192 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 GPR75-ASB3A0A0A6YYF3 556 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 DNASE1P24855 282 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 CSTF2P33240 577 aaKnown RBP eCLIP3.81□□□□□ -1.8
SNHG1-224ENST00000545688 LIMK2P53671 638 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 CDH13P55290 713 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 EFTUD2Q15029 972 aaKnown RBP eCLIP3.81□□□□□ -1.85e-23■■■■■ 44.5
SNHG1-224ENST00000545688 ZNF74Q16587 644 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 UGT3A2Q3SY77 523 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 UGT3A1Q6NUS8 523 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 C1orf122Q6ZSJ8 110 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 GUF1Q8N442 669 aaKnown RBP3.81□□□□□ -1.8
SNHG1-224ENST00000545688 C11orf45Q8TAV5 145 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 LPGAT1Q92604 370 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 SPDL1Q96EA4 605 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 AGAP4Q96P64 663 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 NKX3-1Q99801 234 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-224ENST00000545688 EQTNQ9NQ60 294 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 NDE1Q9NXR1 346 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 DPP3Q9NY33 737 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 RARRES3Q9UL19 164 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 ARID2Q68CP9 1835 aa3.81□□□□□ -1.8
SNHG1-224ENST00000545688 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 PXDNQ92626 1479 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 KANK1Q14678 1352 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 SRRM5B3KS81 715 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 ZBED4O75132 1171 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 HAPLN1P10915 354 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 CAPN3P20807 821 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 HLA-FP30511 346 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 XGP55808 180 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 C1QTNF8P60827 252 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 PCLAFQ15004 111 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 MTHFSDQ2M296 383 aaKnown RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 C11orf63Q6NUN7 778 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 FRRS1Q6ZNA5 592 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 ZNF595Q8IYB9 648 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 POM121L12Q8N7R1 296 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 MCUQ8NE86 351 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 ATP8B4Q8TF62 1192 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 PIGBQ92521 554 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 GAL3ST4Q96RP7 486 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 FAM49AQ9H0Q0 323 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 WNT5BQ9H1J7 359 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 OPA3Q9H6K4 179 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 TRPV4Q9HBA0 871 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 C19orf25Q9UFG5 118 aaPredicted RBP3.8□□□□□ -1.8
SNHG1-224ENST00000545688 TMED3Q9Y3Q3 217 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 NRXN3Q9Y4C0 1643 aa3.8□□□□□ -1.8
SNHG1-224ENST00000545688 NINLQ9Y2I6 1382 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.79□□□□□ -1.8
SNHG1-224ENST00000545688 A6NCN8 305 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 ASB14A6NK59 587 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 FPGTO14772 594 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 GJB3O75712 270 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 PSMC6P62333 389 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 CES4AQ5XG92 561 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 Q6ZR54 194 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 HPS6Q86YV9 775 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 SLC39A11Q8N1S5 342 aa3.79□□□□□ -1.8
SNHG1-224ENST00000545688 THAP8Q8NA92 274 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms