RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	DSC2	Q02487	901 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RCAN2	Q14206	197 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYTL3	Q4VX76	610 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LAIR1	Q6GTX8	287 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPRED2	Q7Z698	418 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYVN1	Q86TM6	617 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM124A	Q86V42	546 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PLD3	Q8IV08	490 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCDC103	Q8IW40	242 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PHACTR4	Q8IZ21	702 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PROKR1	Q8TCW9	393 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LRRC3	Q9BY71	257 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCED1A	Q9H1Q7	454 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RIBC2	Q9H4K1	309 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANKRD34B	A5PLL1	514 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTC34	A8MYJ7	566 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LOC730098	B7Z3J9	87 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KATNA1	O75449	491 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DIRAS1	O95057	198 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MATN4	O95460	622 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANGPTL1	O95841	491 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CFI	P05156	583 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LCK	P06239	509 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DBT	P11182	482 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF30	P17039	623 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HTR1E	P28566	365 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FMO4	P31512	558 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PIK3CG	P48736	1102 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPIA	P49247	311 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EEFSEC	P57772	596 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EMX2	Q04743	252 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GALNT1	Q10472	559 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FOXD4	Q12950	439 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CDK5R2	Q13319	367 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SEMA3A	Q14563	771 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RSBN1	Q5VWQ0	802 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PAQR3	Q6TCH7	311 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	USP43	Q70EL4	1123 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MILR1	Q7Z6M3	343 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	P2RY8	Q86VZ1	359 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CIR1	Q86X95	450 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CACUL1	Q86Y37	369 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HID1	Q8IV36	788 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MMAA	Q8IVH4	418 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FBXO39	Q8N4B4	442 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MCFD2	Q8NI22	146 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CEP76	Q8TAP6	659 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYB5D2	Q8WUJ1	264 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	S100Z	Q8WXG8	99 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FGF14	Q92915	247 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TSGA13	Q96PP4	275 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM83C	Q9BQN1	747 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ASPSCR1	Q9BZE9	553 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HOXD1	Q9GZZ0	328 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IKZF5	Q9H5V7	419 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ACTR8	Q9H981	624 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AMBN	Q9NP70	447 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AIG1	Q9NVV5	245 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF225	Q9UK10	706 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RNF112	Q9ULX5	631 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARL5A	Q9Y689	179 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TET1	Q8NFU7	2136 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SI	P14410	1827 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DNAH12	Q6ZR08	3092 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LINC00854	A0A1B0GVQ3	168 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UPK3BL1	B0FP48	263 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		E5RI56	91 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UPK3BL2	E5RIL1	263 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		J3KR12	359 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ASNA1	O43681	348 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SSX4	O60224	188 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EED	O75530	441 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR4F21	O95013	312 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MFN2	O95140	757 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PGLS	O95336	258 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MT-ND2	P03891	347 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FGF4	P08620	206 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	G6PD	P11413	515 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ALOX12	P18054	663 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD6	P30203	668 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HOXD11	P31277	338 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCR2	P41597	374 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR1	P46091	355 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRPC1	P48995	793 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PGF	P49763	221 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RGS4	P49798	205 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HTR6	P50406	440 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RACK1	P63244	317 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TIAL1	Q01085	375 aa	Known RBP eCLIP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EPS8	Q12929	822 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C18orf21	Q32NC0	220 aa	Predicted RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GTDC1	Q4AE62	458 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	STEAP3	Q658P3	488 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DESI1	Q6ICB0	168 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KIAA1161	Q6NSJ0	714 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IL27RA	Q6UWB1	636 aa		5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ERN2	Q76MJ5	926 aa	Known RBP	5.5	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARMCX6	Q7L4S7	300 aa		5.5	□□□□□ -1.53

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