RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CRYL1Q9Y2S2 319 aa14.3□□□□□ -0.12
USB1-203ENST00000539737 HS3ST3B1Q9Y662 390 aa14.3□□□□□ -0.12
USB1-203ENST00000539737 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 MTORP42345 2549 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 AGPSO00116 658 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 NRP2O60462 931 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 GPC4O75487 556 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 KLHL18O94889 574 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 MSL3P1P0C860 447 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 ATP5DP30049 168 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 GRIA3P42263 894 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 OR1D4P47884 311 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 SLC7A5Q01650 507 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 GUCY2DQ02846 1103 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 FASTKD3Q14CZ7 662 aaKnown RBP14.29□□□□□ -0.12
USB1-203ENST00000539737 TTLL9Q3SXZ7 439 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 CEP128Q6ZU80 1094 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 TTLL10Q6ZVT0 673 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 DNAJC22Q8N4W6 341 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
USB1-203ENST00000539737 PYROXD1Q8WU10 500 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 MAGEB10Q96LZ2 347 aaPredicted RBP14.29□□□□□ -0.12
USB1-203ENST00000539737 IL17FQ96PD4 163 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 C17orf62Q9BQA9 187 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
USB1-203ENST00000539737 AGPAT4Q9NRZ5 378 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 TXLNGQ9NUQ3 528 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 OR6C2Q9NZP2 312 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 SH3BGRL2Q9UJC5 107 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 ITGB1BP2Q9UKP3 347 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 ENTPD4Q9Y227 616 aa14.29□□□□□ -0.12
USB1-203ENST00000539737 ESYT3A0FGR9 886 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 BHMG1C9JSJ3 638 aaPredicted RBP14.28□□□□□ -0.12
USB1-203ENST00000539737 FFAR3O14843 346 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 GPR42O15529 346 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 NIPSNAP2O75323 286 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 SLCO2B1O94956 709 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 CELA2AP08217 269 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 CHRM3P20309 590 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 MAGP20916 626 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 ACADLP28330 430 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 MPP1Q00013 466 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 MGAT5Q09328 741 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 ZNF169Q14929 603 aaPredicted RBP14.28□□□□□ -0.12
USB1-203ENST00000539737 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 KIRREL2Q6UWL6 708 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 ZDHHC24Q6UX98 284 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 UNC5DQ6UXZ4 953 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 RAB42Q8N4Z0 105 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 OR5K2Q8NHB8 316 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 FAR1Q8WVX9 515 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 SLC22A18Q96BI1 424 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 C8orf44Q96CB5 159 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 THOC3Q96J01 351 aaKnown RBP14.28□□□□□ -0.12
USB1-203ENST00000539737 SPSB2Q99619 263 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 PLAC1Q9HBJ0 212 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 NSMCE4AQ9NXX6 385 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 ZFATQ9P243 1243 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 KLHL42Q9P2K6 505 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 MTRF1LQ9UGC7 380 aaKnown RBP14.28□□□□□ -0.12
USB1-203ENST00000539737 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
USB1-203ENST00000539737 AP1M2Q9Y6Q5 423 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 MAU2Q9Y6X3 613 aa14.28□□□□□ -0.12
USB1-203ENST00000539737 A0A0J9YY10 115 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 CD63P08962 238 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 GSTA2P09210 222 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 CARSP49589 748 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 ST13P50502 369 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 ILF2Q12905 390 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 AIMP2Q13155 320 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 KIR2DS3Q14952 304 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 NKG7Q16617 165 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 CCDC25Q86WR0 208 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 PALM2Q8IXS6 379 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 SKA2Q8WVK7 121 aaPredicted RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 TM9SF4Q92544 642 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 FOPNLQ96NB1 174 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 TAAR6Q96RI8 345 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 AARSD1Q9BTE6 412 aaKnown RBP14.27□□□□□ -0.13
USB1-203ENST00000539737 EURLQ9NYK6 297 aa14.27□□□□□ -0.13
USB1-203ENST00000539737 VPS26AO75436 327 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 HAUS5O94927 633 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 EDN3P14138 238 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 TSFMP43897 325 aaKnown RBP14.26□□□□□ -0.13
USB1-203ENST00000539737 GCGRP47871 477 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 SOX8P57073 446 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 GBX1Q14549 363 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 TEDDM1Q5T9Z0 273 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 UGT3A1Q6NUS8 523 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 CNSTQ6PJW8 725 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 SLC26A11Q86WA9 606 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 VRK3Q8IV63 474 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 DCUN1D3Q8IWE4 304 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 LINC01555Q8NAE3 123 aa14.26□□□□□ -0.13
USB1-203ENST00000539737 CFAP61Q8NHU2 1237 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms