RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 SIX5Q8N196 739 aa14.15□□□□□ -0.14
CACNB1-206ENST00000539338 TSEN15Q8WW01 171 aaKnown RBP14.15□□□□□ -0.14
CACNB1-206ENST00000539338 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
CACNB1-206ENST00000539338 TBX5Q99593 518 aa14.15□□□□□ -0.14
CACNB1-206ENST00000539338 MRPS30Q9NP92 439 aaKnown RBP14.15□□□□□ -0.14
CACNB1-206ENST00000539338 CFAP20Q9Y6A4 193 aaKnown RBP14.15□□□□□ -0.14
CACNB1-206ENST00000539338 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 PRAMEF11O60813 436 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 ATP1B2P14415 290 aaPredicted RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 RPS6KA3P51812 740 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 TGFBIQ15582 683 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 PTCHD3Q3KNS1 767 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 CLEC12AQ5QGZ9 265 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 PEX5LQ8IYB4 626 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 CMTM8Q8IZV2 173 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 RBM18Q96H35 190 aaKnown RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 DMRTB1Q96MA1 342 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 PCBD2Q9H0N5 130 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 SRMSQ9H3Y6 488 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 MRTO4Q9UKD2 239 aaKnown RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 STATHP02808 62 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 CRISP3P54108 245 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 PCBP2Q15366 365 aaKnown RBP eCLIP14.14□□□□□ -0.152e-7■■■■■ 30.9
CACNB1-206ENST00000539338 OLFML2AQ68BL7 652 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 C15orf39Q6ZRI6 1047 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 TMC8Q8IU68 726 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 OXR1Q8N573 874 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 KCT2Q8NC54 265 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 OTUB2Q96DC9 234 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 LOC100130705A0A1B0GUX0 176 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 FAM172BPA6NC97 362 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 FABP12A6NFH5 140 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 KDELR3O43731 214 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 GBAP04062 536 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 ACP5P13686 325 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 DSTNP60981 165 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 BNC1Q01954 994 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 SOX4Q06945 474 aaPredicted RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 SERINC3Q13530 473 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 CRB2Q5IJ48 1285 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 ZNF311Q5JNZ3 666 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 LRRC66Q68CR7 880 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 COX18Q8N8Q8 333 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 DENND1AQ8TEH3 1009 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 IFT27Q9BW83 186 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 ADAP2Q9NPF8 381 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 IL36AQ9UHA7 158 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 EDARQ9UNE0 448 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 SPIN1Q9Y657 262 aaPredicted RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 MYH10P35580 1976 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 J3QRK9 145 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 DNAJB1P25685 340 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 GKP32189 559 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 E2F2Q14209 437 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 MEP1AQ16819 746 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 DUOXA1Q1HG43 343 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 THOC6Q86W42 341 aaKnown RBP14.14□□□□□ -0.15
CACNB1-206ENST00000539338 UFD1Q92890 307 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 FBXL8Q96CD0 374 aa14.14□□□□□ -0.15
CACNB1-206ENST00000539338 CREG1O75629 220 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 XKP51811 444 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 ZNF33AQ06730 810 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 GHDCQ8N2G8 530 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 NSUN5Q96P11 429 aaKnown RBP14.13□□□□□ -0.15
CACNB1-206ENST00000539338 EFCAB11Q9BUY7 163 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 HAPLN2Q9GZV7 340 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 WDR6Q9NNW5 1121 aaKnown RBP14.13□□□□□ -0.15
CACNB1-206ENST00000539338 ALPPP05187 535 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 SLC11A1P49279 550 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 PHF19Q5T6S3 580 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 MBOAT1Q6ZNC8 495 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 GPRIN1Q7Z2K8 1008 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 PIK3R3Q92569 461 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 MRM3Q9HC36 420 aaKnown RBP14.13□□□□□ -0.15
CACNB1-206ENST00000539338 IL1RAPQ9NPH3 570 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 GIN1Q9NXP7 522 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 RIMKLBQ9ULI2 386 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 A6NCN8 305 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 ZNF487B1APH4 448 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 OR1I1O60431 355 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 IVDP26440 423 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 FAUP35544 74 aaKnown RBP14.13□□□□□ -0.15
CACNB1-206ENST00000539338 ARFIP1P53367 373 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 KIAA1161Q6NSJ0 714 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 GPR151Q8TDV0 419 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 GAL3ST4Q96RP7 486 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 MED28Q9H204 178 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 RPL36Q9Y3U8 105 aaKnown RBP14.13□□□□□ -0.15
CACNB1-206ENST00000539338 MYOCOSA0A1B0GUC4 107 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 MTMR11A4FU01 709 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 CLDN4O14493 209 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 SLC22A1O15245 554 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 ALDH3A2P51648 485 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 AP1S2P56377 157 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 DNAJB13P59910 316 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 PRAMEF14Q5SWL7 426 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 IDNKQ5T6J7 187 aa14.13□□□□□ -0.15
CACNB1-206ENST00000539338 PRAMEF13Q5VWM6 474 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms