RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 VASH2Q86V25 355 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 GALNT6Q8NCL4 622 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 SLC22A18Q96BI1 424 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 MTBPQ96DY7 904 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TCTN2Q96GX1 697 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 C10orf90Q96M02 699 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 ZNF578Q96N58 590 aaPredicted RBP12.53□□□□□ -0.4
CHFR-216ENST00000538235 OR2A5Q96R48 311 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TMEM109Q9BVC6 243 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 WWOXQ9NZC7 414 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 CD274Q9NZQ7 290 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TLK1Q9UKI8 766 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 MGAQ8IWI9 3026 aa12.52□□□□□ -0.4
CHFR-216ENST00000538235 CCDC151A5D8V7 595 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 A8MT66 165 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 H0YGG7 62 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 EFSO43281 561 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 CNOT3O75175 753 aaKnown RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 PROCP04070 461 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 HIST1H2AGP0C0S8 130 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 H2AFXP16104 143 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 HIST1H2ADP20671 130 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 RBMS1P29558 406 aaKnown RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 EIF2S3P41091 472 aaKnown RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 RAB15P59190 212 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ARF3P61204 181 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 NFKB2Q00653 900 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 REEP5Q00765 189 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 FOXK2Q01167 660 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ACY1Q03154 408 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 SLC18A2Q05940 514 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 FAM83EQ2M2I3 478 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 PRTGQ2VWP7 1150 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHFR-216ENST00000538235 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 DCAF12Q5T6F0 453 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 CAPN13Q6MZZ7 669 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 MCATQ8IVS2 390 aaKnown RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 RAB42Q8N4Z0 105 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ZNF655Q8N720 491 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 PTGR2Q8N8N7 351 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ABHD11Q8NFV4 315 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 MYRIPQ8NFW9 859 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 OR4K1Q8NGD4 311 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 STAG3L4Q8TBR4 150 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 SLC5A11Q8WWX8 675 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 NKD1Q969G9 470 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 HIST1H2AHQ96KK5 128 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 HIST1H2AJQ99878 128 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 H2AFJQ9BTM1 129 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ENAMQ9NRM1 1142 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 THSD1Q9NS62 852 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 SLC22A11Q9NSA0 550 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 DHCR7Q9UBM7 475 aaKnown RBP12.52□□□□□ -0.41
CHFR-216ENST00000538235 RARRES3Q9UL19 164 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 ZMIZ1Q9ULJ6 1067 aa12.52□□□□□ -0.41
CHFR-216ENST00000538235 LOC101059948A0A1B0GTJ6 334 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 G3V2L1 256 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PPP6CO00743 305 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ZNF749O43361 778 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 DLX3O60479 287 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 RAD1O60671 282 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 SCRG1O75711 98 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 FKBP9O95302 570 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 CAPN1P07384 714 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 COL6A2P12110 1019 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ARL4DP49703 201 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
CHFR-216ENST00000538235 ABATP80404 500 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 E2F2Q14209 437 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 IL11RAQ14626 422 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PFKFB4Q16877 469 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 CDKL4Q5MAI5 379 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 SULT1C3Q6IMI6 304 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
CHFR-216ENST00000538235 FAM198BQ6UWH4 519 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 CEACAM20Q6UY09 585 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ATG14Q6ZNE5 492 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 CCDC91Q7Z6B0 441 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 C17orf64Q86WR6 236 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PPP1R3BQ86XI6 285 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 FGF11Q92914 225 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ZFYVE21Q9BQ24 234 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 TRIM54Q9BYV2 358 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 CD244Q9BZW8 370 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 ANKMY1Q9P2S6 941 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 SLC17A7Q9P2U7 560 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PLCL2Q9UPR0 1127 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
CHFR-216ENST00000538235 FITM1A5D6W6 292 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms