RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 LINC01555Q8NAE3 123 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 HM13Q8TCT9 377 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF398Q8TD17 642 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 DENND1AQ8TEH3 1009 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 C10orf90Q96M02 699 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 AGPAT1Q99943 283 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 UTP23Q9BRU9 249 aaKnown RBP8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 TTYH2Q9BSA4 534 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 MENTQ9BUN1 341 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 CEP41Q9BYV8 373 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 ADAM19Q9H013 955 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 TP63Q9H3D4 680 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 SYNPO2LQ9H987 977 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 PARVAQ9NVD7 372 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 OR6C2Q9NZP2 312 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 TEKT2Q9UIF3 430 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 PLAGL1Q9UM63 463 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 FAM215AQ9Y5M1 114 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 TENM1Q9UKZ4 2725 aa8.36□□□□□ -1.07
TRAPPC9-212ENST00000521944 SYT5O00445 386 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 HS6ST1O60243 411 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 NME2P1O60361 137 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 SEC24DO94855 1032 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 SIX3O95343 332 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 NDST3O95803 873 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 ICAM2P13598 275 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 TFEBP19484 476 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 NME2P22392 152 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 CXCR2P25025 360 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 AKT1P31749 480 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 SHMT2P34897 504 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 RFC3P40938 356 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 PRKCIP41743 596 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 IFI35P80217 286 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 SLC25A11Q02978 314 aaKnown RBP8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 MAPKAPK3Q16644 382 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 FLYWCH1Q4VC44 716 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 PLAG1Q6DJT9 500 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 FRMPD2BQ6IN97 320 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 ACAD11Q709F0 780 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 ULK2Q8IYT8 1036 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 PQLC3Q8N755 202 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 TMEM178AQ8NBL3 297 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 FAM222BQ8WU58 562 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZNF354BQ96LW1 612 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 TUBB6Q9BUF5 446 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
TRAPPC9-212ENST00000521944 LOC285095A0A1B0GVY8 99 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 GABRR3A8MPY1 467 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 AGAP14A8MT82 685 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 TMCO5BA8MYB1 307 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 ISM1B1AKI9 464 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 DEAF1O75398 565 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 PDE9AO76083 593 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZFP36L2P47974 494 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 VSX2P58304 361 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 KIR2DS3Q14952 304 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 SYT16Q17RD7 645 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 GXYLT1Q4G148 440 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 TCTE1Q5JU00 501 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 CCDC122Q5T0U0 273 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 CCDC183Q5T5S1 534 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 ZDHHC20Q5W0Z9 365 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 PRMT9Q6P2P2 845 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 FIGLAQ6QHK4 219 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 LANCL3Q6ZV70 420 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 OR52N2Q8NGI0 321 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 SLCO2A1Q92959 643 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 SELENOSQ9BQE4 189 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 BDH2Q9BUT1 245 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 MRPL18Q9H0U6 180 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 PNPLA3Q9NST1 481 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 UBP1Q9NZI7 540 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 TRPC4Q9UBN4 977 aa8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 HOOK1Q9UJC3 728 aaKnown RBP8.34□□□□□ -1.07
TRAPPC9-212ENST00000521944 OR2W5A6NFC9 320 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 USP27XA6NNY8 438 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 IFRD1O00458 451 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 RASGRF2O14827 1237 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 PHF1O43189 567 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ARHGEF9O43307 516 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 CDC40O60508 579 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 EIF4EBP3O60516 100 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC25A12O75746 678 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 HEXBP07686 556 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 DESP17661 470 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 SLC26A3P40879 764 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 XIAPP98170 497 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 PPIDQ08752 370 aaKnown RBP8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 ITGA9Q13797 1035 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 DPYSL3Q14195 570 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 TAZQ16635 292 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 MEP1AQ16819 746 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 BTBD16Q32M84 506 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 KRTAP24-1Q3LI83 254 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 SIRPB2Q5JXA9 342 aa8.33□□□□□ -1.08
TRAPPC9-212ENST00000521944 PODNL1Q6PEZ8 512 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms