RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MTPNP58546 118 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 SPCS2Q15005 226 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 OXA1LQ15070 435 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
TCOF1-213ENST00000514442 MED27Q6P2C8 311 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 DPY19L3Q6ZPD9 716 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 PTCHD4Q6ZW05 846 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 HID1Q8IV36 788 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 CLDN19Q8N6F1 224 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 CNDP2Q96KP4 475 aaKnown RBP12.8□□□□□ -0.36
TCOF1-213ENST00000514442 MTERF1Q99551 399 aaKnown RBP12.8□□□□□ -0.36
TCOF1-213ENST00000514442 KLHL1Q9NR64 748 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 TMEM248Q9NWD8 314 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 CDH7Q9ULB5 785 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 MAP4K5Q9Y4K4 846 aa12.8□□□□□ -0.36
TCOF1-213ENST00000514442 TTC34A8MYJ7 566 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 CASP3P42574 277 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 CREB5Q02930 508 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SLC10A2Q12908 348 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 C9orf64Q5T6V5 341 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 DDI2Q5TDH0 399 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 FAM109AQ8N4B1 249 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TRIT1Q9H3H1 467 aaKnown RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SMURF2Q9HAU4 748 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 CLDND1Q9NY35 253 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MAT2BQ9NZL9 334 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 FAM92AA1XBS5 289 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 B8ZZF3 427 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 OR1F1O43749 312 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 ECI2O75521 394 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 IL32P24001 234 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MYL9P24844 172 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MAGEA11P43364 429 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 NRIP1P48552 1158 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MORN1Q5T089 497 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MAPK15Q8TD08 544 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 POF1BQ8WVV4 589 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 LMLNQ96KR4 655 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MYRFLQ96LU7 910 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 RIPOR3Q96MK2 946 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SNTG1Q9NSN8 517 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 UCKL1Q9NWZ5 548 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 ERVK-18Q9QC07 812 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 COL16A1Q07092 1604 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 A8MT66 165 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 ANKRD66B4E2M5 251 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 EDIL3O43854 480 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 OR2B3O76000 313 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TAF8Q7Z7C8 310 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SIMC1Q8NDZ2 872 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 OR6Q1Q8NGQ2 317 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 OR10A6Q8NH74 314 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MOCS1Q9NZB8 636 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 PCDH10Q9P2E7 1040 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 MLXQ9UH92 298 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 EIF3FO00303 357 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 SAP18O00422 153 aaKnown RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TYRP14679 529 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 HSF2Q03933 536 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TOMM20Q15388 145 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
TCOF1-213ENST00000514442 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 NUS1Q96E22 293 aa12.79□□□□□ -0.36
TCOF1-213ENST00000514442 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 FAM234BA2RU67 622 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 LEFTY2O00292 366 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 TP73O15350 636 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 XPNPEP2O43895 674 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 NCS1P62166 190 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 RHAGQ02094 409 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 RTP2Q5QGT7 225 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 AGAP6Q5VW22 663 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 LCN8Q6JVE9 175 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 ZDHHC21Q8IVQ6 265 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 TP53INP2Q8IXH6 220 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 CRELD1Q96HD1 420 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 AGAP4Q96P64 663 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 SLC2A13Q96QE2 648 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 TFB2MQ9H5Q4 396 aaKnown RBP12.78□□□□□ -0.36
TCOF1-213ENST00000514442 CDC7O00311 574 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 WNT9AO14904 365 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 KDELR3O43731 214 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 ERN1O75460 977 aaKnown RBP12.78□□□□□ -0.36
TCOF1-213ENST00000514442 ITGB1P05556 798 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 EMP3P54852 163 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 SERINC3Q13530 473 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 CYS1Q717R9 158 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 ZNF431Q8TF32 576 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-213ENST00000514442 XAGE5Q8WWM1 108 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 IGSF8Q969P0 613 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 CCDC32Q9BV29 185 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 C20orf27Q9GZN8 174 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 DPEP2Q9H4A9 486 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 PRAMEF11O60813 436 aa12.78□□□□□ -0.36
TCOF1-213ENST00000514442 C8GP07360 202 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms