RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR2A5Q96R48 311 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 SPSB2Q99619 263 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 HIST1H2AJQ99878 128 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 AARSD1Q9BTE6 412 aaKnown RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 H2AFJQ9BTM1 129 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 PCBD2Q9H0N5 130 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 DDX47Q9H0S4 455 aaKnown RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 TMEM184CQ9NVA4 438 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 TAS2R13Q9NYV9 303 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 PCYOX1Q9UHG3 505 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 TRMT6Q9UJA5 497 aaKnown RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 FBXL4Q9UKA2 621 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 MED16Q9Y2X0 877 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 UNC79Q9P2D8 2635 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 CREBBPQ92793 2442 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 MASP2O00187 686 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 SOCS6O14544 535 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 DNALI1O14645 258 aaPredicted RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 AHSGP02765 367 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 F7P08709 466 aaPredicted RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 ANXA5P08758 320 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 EZRP15311 586 aaKnown RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 CXCR2P25025 360 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 GLRBP48167 497 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 EMP2P54851 167 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 MPP1Q00013 466 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 KLC1Q07866 573 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 DHX9Q08211 1270 aaKnown RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 NDUFA9Q16795 377 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 PRTGQ2VWP7 1150 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 BBS9Q3SYG4 887 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 TUBB8Q3ZCM7 444 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 VWA2Q5GFL6 755 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 COX15Q7KZN9 410 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 PAQR7Q86WK9 346 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 TMEM151BQ8IW70 566 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 CPNE9Q8IYJ1 553 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 AGGF1Q8N302 714 aaeCLIP11.39□□□□□ -0.59
MED28-203ENST00000503945 CISD2Q8N5K1 135 aaKnown RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 GIMAP7Q8NHV1 300 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 DNAJB14Q8TBM8 379 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 CD200R1Q8TD46 325 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 PCSK5Q92824 1860 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 SLCO2A1Q92959 643 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 C19orf60Q96EN9 201 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 MVB12AQ96EY5 273 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 MMABQ96EY8 250 aaPredicted RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 RUNDC3BQ96NL0 473 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 CRB3Q9BUF7 120 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 SLC29A3Q9BZD2 475 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 LHPPQ9H008 270 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 ILKAPQ9H0C8 392 aaPredicted RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 PARVBQ9HBI1 364 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 SLC6A20Q9NP91 592 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 TRPC4Q9UBN4 977 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 CTSFQ9UBX1 484 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 C3orf18Q9UK00 162 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
MED28-203ENST00000503945 COPG1Q9Y678 874 aaKnown RBP11.39□□□□□ -0.59
MED28-203ENST00000503945 IGKV1-8A0A0C4DH67 115 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 PABPN1LA6NDY0 278 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 SLC16A5O15375 505 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 NRP2O60462 931 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 C8GP07360 202 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 FBLP22087 321 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 SLC26A3P40879 764 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 PAFAH1B1P43034 410 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 AVPR1BP47901 424 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 IL2P60568 153 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 GNG11P61952 73 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 FAM53BQ14153 422 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 CRYMQ14894 314 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 ATG9BQ674R7 924 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 ZNF425Q6IV72 752 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 PAQR3Q6TCH7 311 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 KIAA0408Q6ZU52 694 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 NDUFAF7Q7L592 441 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 PIWIL4Q7Z3Z4 852 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 KLHL7Q8IXQ5 586 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 PRSS58Q8IYP2 241 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 MYO1HQ8N1T3 1032 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 DTWD1Q8N5C7 304 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 OR11G2Q8NGC1 345 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 SNRNP40Q96DI7 357 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 THOC3Q96J01 351 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 LMF1Q96S06 567 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 NDNQ99608 321 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 TRIM54Q9BYV2 358 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 RUVBL1Q9Y265 456 aaKnown RBP11.38□□□□□ -0.59
MED28-203ENST00000503945 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 SAR1BQ9Y6B6 198 aa11.38□□□□□ -0.59
MED28-203ENST00000503945 ANKRD12Q6UB98 2062 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 IGLV3-12A0A075B6K2 115 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 KCNE1BA0A087WTH5 132 aa11.37□□□□□ -0.59
MED28-203ENST00000503945 MAP2K7O14733 419 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms