RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 ERVK-21P61565 698 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 RAB33AQ14088 237 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 LRP8Q14114 963 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 ZNF630Q2M218 657 aaPredicted RBP10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 MSANTD1Q6ZTZ1 278 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 SAMD14Q8IZD0 417 aaPredicted RBP10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 KRTCAP2Q8N6L1 136 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 ISOC1Q96CN7 298 aa10.46□□□□□ -0.74
LIMCH1-205ENST00000503057 KLK1P06870 262 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SLC35G6P0C7Q6 338 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 BPIP17213 487 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 CAPN3P20807 821 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SLC6A4P31645 630 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 GGT5P36269 586 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 WASP42768 502 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 RPS13P62277 151 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 DSC3Q14574 896 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 IQCCQ4KMZ1 466 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ZNF805Q5CZA5 627 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FAM26DQ5JW98 314 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FAM20CQ8IXL6 584 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 OR9A1PQ8NGU1 263 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 PIGXQ8TBF5 258 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SMG9Q9H0W8 520 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 OSER1Q9NX31 292 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 GTF2A1LQ9UNN4 478 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MAN2B2Q9Y2E5 1009 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 WNT6Q9Y6F9 365 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ANKRD31Q8N7Z5 1873 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SNAP29O95721 258 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ATXN1LP0C7T5 689 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 JUPP14923 745 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MYF6P23409 242 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MYL9P24844 172 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SLC9A5Q14940 896 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 VITQ6UXI7 678 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 APCDD1Q8J025 514 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 AHCYL2Q96HN2 611 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 C1QTNF1Q9BXJ1 281 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 WDR26Q9H7D7 661 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FAM86C2PA6NEL3 165 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 STK19P49842 368 aaPredicted RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 RGS8P57771 180 aaPredicted RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FPGSQ05932 587 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ZNF763Q0D2J5 394 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TMEM115Q12893 351 aaPredicted RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 KIAA1614Q5VZ46 1190 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TNFAIP8L2Q6P589 184 aaPredicted RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MACC1Q6ZN28 852 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FAM124AQ86V42 546 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FIBINQ8TAL6 211 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 RFKQ969G6 155 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 KCNC2Q96PR1 638 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 CHCHD6Q9BRQ6 235 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TRIM8Q9BZR9 551 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 NEUROD4Q9HD90 331 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TLR9Q9NR96 1032 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 SPHK2Q9NRA0 654 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 RNF186Q9NXI6 227 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 P2RX2Q9UBL9 471 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FBXW2Q9UKT8 454 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FAM47E-STBD1D6RA91 191 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 POP7O75817 140 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 IFNGP01579 166 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 CD36P16671 472 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 IL7RP16871 459 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 GTF2E2P29084 291 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TMBIM6P55061 237 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 OR4D2P58180 307 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 CDK6Q00534 326 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 PDGFRLQ15198 375 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MEP1AQ16819 746 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 FBXO43Q4G163 708 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 LY6G5CQ5SRR4 150 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TMPRSS11AQ6ZMR5 421 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 DPY19L3Q6ZPD9 716 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 NEK10Q6ZWH5 1172 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 TEX26Q8N6G2 289 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 LCN9Q8WX39 176 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ITPAQ9BY32 194 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ZDHHC4Q9NPG8 344 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 ZNF624Q9P2J8 865 aaPredicted RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 NDOR1Q9UHB4 597 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 MRPS33Q9Y291 106 aaKnown RBP10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 OR10H1Q9Y4A9 318 aa10.45□□□□□ -0.74
LIMCH1-205ENST00000503057 LEFTY1O75610 366 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 DNAJB5O75953 348 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 IFNA16P05015 189 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 IL12RB1P42701 662 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 CLDN8P56748 225 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 QPRTQ15274 297 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 CDKL4Q5MAI5 379 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 FGD2Q7Z6J4 655 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 CBARPQ8N350 705 aaPredicted RBP10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 NFKBIDQ8NI38 313 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 MAPKAP1Q9BPZ7 522 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 SMURF2Q9HAU4 748 aa10.44□□□□□ -0.74
LIMCH1-205ENST00000503057 MAT2BQ9NZL9 334 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms