RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 HIF1AQ16665 826 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 HKDC1Q2TB90 917 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 TUBB8Q3ZCM7 444 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 HP1BP3Q5SSJ5 553 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 RBM20Q5T481 1227 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PRAMEF13Q5VWM6 474 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 SLC6A19Q695T7 634 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 HIBCHQ6NVY1 386 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 KIAA0408Q6ZU52 694 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 GALNT7Q86SF2 657 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 IGDCC3Q8IVU1 814 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PALM2Q8IXS6 379 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MYO1HQ8N1T3 1032 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CSNK1A1LQ8N752 337 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 RBMXL3Q8N7X1 1067 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 STT3BQ8TCJ2 826 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MCOLN3Q8TDD5 553 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PNPLA2Q96AD5 504 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MIEF2Q96C03 454 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 LRRC39Q96DD0 335 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MVB12AQ96EY5 273 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CFAP36Q96G28 342 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 VPS50Q96JG6 964 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PDLIM2Q96JY6 352 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 C10orf90Q96M02 699 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CCDC138Q96M89 665 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 OR2A5Q96R48 311 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 TRIM51Q9BSJ1 452 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CRB3Q9BUF7 120 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 ZNF552Q9H707 407 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 SYNPO2LQ9H987 977 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PPANQ9NQ55 473 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CCDC177Q9NQR7 707 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 LUZP4Q9P127 313 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 STOX2Q9P2F5 926 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 FBXL4Q9UKA2 621 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CDC14AQ9UNH5 594 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 CHMP2BQ9UQN3 213 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 PDE10AQ9Y233 779 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 RUVBL1Q9Y265 456 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 MAP4K5Q9Y4K4 846 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 HS3ST3B1Q9Y662 390 aa8.08□□□□□ -1.12
HMGXB4-207ENST00000498212 IGLV3-12A0A075B6K2 115 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 EFCAB8A8MWE9 144 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 H7BY64 318 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TXNDC9O14530 226 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 SLC16A5O15375 505 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TTI1O43156 1089 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 SEC31AO94979 1220 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 ANXA5P08758 320 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 HIST1H2AGP0C0S8 130 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 HIST1H2ADP20671 130 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 HRH2P25021 359 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 ITGA8P53708 1063 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 CDKN2DP55273 166 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 ARL4CP56559 192 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 RELAQ04206 551 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 UBAP2LQ14157 1087 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 INPP5JQ15735 1006 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TEDDM1Q5T9Z0 273 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 GARNL3Q5VVW2 1013 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 FAM45BPQ6NSW5 357 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PAQR3Q6TCH7 311 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 KIRREL2Q6UWL6 708 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 MBOAT1Q6ZNC8 495 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PRSS58Q8IYP2 241 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 GPATCH11Q8N954 259 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 Q8NA96 180 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 FAM45AQ8TCE6 357 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TM9SF4Q92544 642 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 MMABQ96EY8 250 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 LINGO1Q96FE5 620 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 SNF8Q96H20 258 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 HIST1H2AHQ96KK5 128 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PWWP2AQ96N64 755 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PRAP1Q96NZ9 151 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 HIST1H2AJQ99878 128 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 WDR83Q9BRX9 315 aaKnown RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 H2AFJQ9BTM1 129 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TRIM31Q9BZY9 425 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 ATG10Q9H0Y0 220 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PARVBQ9HBI1 364 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PLAC1Q9HBJ0 212 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TMEM184CQ9NVA4 438 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 MAP10Q9P2G4 905 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 SLC17A6Q9P2U8 582 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 RNF14Q9UBS8 474 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 ADAMTS6Q9UKP5 1117 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 CORO1CQ9ULV4 474 aaPredicted RBP8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 PYCARDQ9ULZ3 195 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 B3GNT3Q9Y2A9 372 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 TEX264Q9Y6I9 313 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 SPTA1P02549 2419 aa8.07□□□□□ -1.12
HMGXB4-207ENST00000498212 A0A0A6YYC8 382 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 PABPN1LA6NDY0 278 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-207ENST00000498212 I3L1I5 382 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms