RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SYVN1Q86TM6 617 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 GPSM1Q86YR5 675 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 OR56A3Q8NH54 315 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 CABS1Q96KC9 395 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 GBP5Q96PP8 586 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 FAM117AQ9C073 453 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 PADI2Q9Y2J8 665 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 DYRK1BQ9Y463 629 aa15.24■□□□□ 0.03
LIME1-209ENST00000494776 NBEAQ8NFP9 2946 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 TXNDC9O14530 226 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 DSCR3O14972 297 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 ATXN7O15265 892 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 WISP3O95389 354 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 S100BP04271 92 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 CD63P08962 238 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 PIM1P11309 404 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 CDH1P12830 882 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 CD1DP15813 335 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 NPPBP16860 134 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 MSH2P43246 934 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 HNMTP50135 292 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 PMS2P54278 862 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 RELAQ04206 551 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 SLC9A5Q14940 896 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 NCF4Q15080 339 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 TGFBIQ15582 683 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 TBR1Q16650 682 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 DEFB109BQ30KR1 87 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 NKAIN1Q4KMZ8 207 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 CRTC2Q53ET0 693 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 SOWAHCQ53LP3 525 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 ATP1A1-AS1Q5TC04 95 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 ZNF385CQ66K41 422 aaPredicted RBP15.23■□□□□ 0.03
LIME1-209ENST00000494776 BORAQ6PGQ7 559 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 FAM198BQ6UWH4 519 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 PLD3Q8IV08 490 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 CSNK1A1LQ8N752 337 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 TTC9Q92623 222 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 ZNF285Q96NJ3 590 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 FUT8Q9BYC5 575 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 NMRAL1Q9HBL8 299 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 CD274Q9NZQ7 290 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 RNF112Q9ULX5 631 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 SH2B3Q9UQQ2 575 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 ACOT9Q9Y305 439 aa15.23■□□□□ 0.03
LIME1-209ENST00000494776 PCM1Q15154 2024 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 A0A087X1B8 175 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 FITM1A5D6W6 292 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 RECKO95980 971 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 LTA4HP09960 611 aaKnown RBP15.22■□□□□ 0.03
LIME1-209ENST00000494776 SLC35E2BP0CK96 405 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 TYK2P29597 1187 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 CCR10P46092 362 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 SERPINB8P50452 374 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 SERPINB9P50453 376 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 CCR8P51685 355 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 CSNK1G2P78368 415 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 MUM1Q2TAK8 710 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
LIME1-209ENST00000494776 CCDC91Q7Z6B0 441 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 THOC6Q86W42 341 aaKnown RBP15.22■□□□□ 0.03
LIME1-209ENST00000494776 TBC1D19Q8N5T2 526 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 METTL27Q8N6F8 245 aaPredicted RBP15.22■□□□□ 0.03
LIME1-209ENST00000494776 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 EXT2Q93063 718 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 WBP1Q96G27 269 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 UBXN10Q96LJ8 280 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 OR2A5Q96R48 311 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 PAFAH2Q99487 392 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 SNX15Q9NRS6 342 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 WWOXQ9NZC7 414 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 TCFL5Q9UL49 500 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 POLHQ9Y253 713 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 SLC22A14Q9Y267 594 aa15.22■□□□□ 0.03
LIME1-209ENST00000494776 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 FEZF1A0PJY2 475 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 ZNF500O60304 480 aaPredicted RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 KRT38O76015 456 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 WDR47O94967 919 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 CAPN1P07384 714 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 FAM153BP0C7A2 387 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 SPTBP11277 2137 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 TFEBP19484 476 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 GMPRP36959 345 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 NFKB2Q00653 900 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 OR4D1Q15615 310 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 UGT8Q16880 541 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 FAM83EQ2M2I3 478 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 ZXDCQ2QGD7 858 aaPredicted RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 HKDC1Q2TB90 917 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 FAM153CQ494X1 144 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 TCAIMQ8N3R3 496 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 LSM14AQ8ND56 463 aaKnown RBP15.21■□□□□ 0.03
LIME1-209ENST00000494776 STAG3L4Q8TBR4 150 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 SLC5A11Q8WWX8 675 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 SLC39A7Q92504 469 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 KIAA1191Q96A73 305 aa15.21■□□□□ 0.03
LIME1-209ENST00000494776 COL26A1Q96A83 441 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms