RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 IMPA1P29218 277 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SOX8P57073 446 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 AIMP2Q13155 320 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 CRYMQ14894 314 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ARHGAP19Q14CB8 494 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SYT16Q17RD7 645 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 MUM1Q2TAK8 710 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PRTGQ2VWP7 1150 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 RBM20Q5T481 1227 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 FHL5Q5TD97 284 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 FAAH2Q6GMR7 532 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PRMT9Q6P2P2 845 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PAQR3Q6TCH7 311 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 MBOAT1Q6ZNC8 495 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PCGF5Q86SE9 256 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 HPS6Q86YV9 775 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 LMNTD2Q8IXW0 634 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 LRRC56Q8IYG6 542 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 ZADH2Q8N4Q0 377 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 CSNK1A1LQ8N752 337 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 C2CD4AQ8NCU7 369 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 GALNT11Q8NCW6 608 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SNRNP40Q96DI7 357 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 THOC3Q96J01 351 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 C10orf90Q96M02 699 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 OR2A5Q96R48 311 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 EBNA1BP2Q99848 306 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 MACROD1Q9BQ69 325 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 CRB3Q9BUF7 120 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ATG10Q9H0Y0 220 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 WDR54Q9H977 334 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SEMA3GQ9NS98 782 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ASF1BQ9NVP2 202 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 KLHL42Q9P2K6 505 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SLC17A6Q9P2U8 582 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 TRPC4Q9UBN4 977 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ZNF282Q9UDV7 671 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 PCYOX1Q9UHG3 505 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 TRMT6Q9UJA5 497 aaKnown RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 C3orf18Q9UK00 162 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 B3GNT3Q9Y2A9 372 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 CSAG2Q9Y5P2 127 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 COMMD10Q9Y6G5 202 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 SVILO95425 2214 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 USP9YO00507 2555 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 CLEC18AA5D8T8 446 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CES2O00748 559 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 P2RX6O15547 441 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 FOXS1O43638 330 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 LCMT2O60294 686 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 KLHL18O94889 574 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CCNDBP1O95273 360 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ALPPP05187 535 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ENO3P13929 434 aaPredicted RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 ELK3P41970 407 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 SKIV2L2P42285 1042 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 EMP2P54851 167 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CDKN2DP55273 166 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 GNG11P61952 73 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 SNRPNP63162 240 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 Q0VFX4 171 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 PTK6Q13882 451 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 NAA25Q14CX7 972 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 TUBB8Q3ZCM7 444 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ZNF425Q6IV72 752 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 UGT3A1Q6NUS8 523 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CLEC18BQ6UXF7 455 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 LINC00696Q6ZRV3 163 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CUZD1Q86UP6 607 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ANKMY2Q8IV38 441 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 PALM2Q8IXS6 379 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 SHISA5Q8N114 240 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CLEC18CQ8NCF0 446 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 FBXO15Q8NCQ5 510 aaPredicted RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 OR11G2Q8NGC1 345 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 DNAJB14Q8TBM8 379 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 MCOLN3Q8TDD5 553 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 RERGQ96A58 199 aaPredicted RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 NACC2Q96BF6 587 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CFAP36Q96G28 342 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 FAM167BQ9BTA0 163 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 TRIM31Q9BZY9 425 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ILKAPQ9H0C8 392 aaPredicted RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 ZNF160Q9HCG1 818 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 LRRC4CQ9HCJ2 640 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 PRM3Q9NNZ6 103 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 ENAMQ9NRM1 1142 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 UTP6Q9NYH9 597 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 TAS2R13Q9NYV9 303 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 NXT1Q9UKK6 140 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 CDC14AQ9UNH5 594 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 CHMP2BQ9UQN3 213 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 PDE10AQ9Y233 779 aa9.13□□□□□ -0.95
MSH5-218ENST00000494646 MRPS2Q9Y399 296 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 COPG1Q9Y678 874 aaKnown RBP9.13□□□□□ -0.95
MSH5-218ENST00000494646 HIVEP3Q5T1R4 2406 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms