RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 NUDT4Q9NZJ9 180 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 AP1M2Q9Y6Q5 423 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 ZFHX4Q86UP3 3567 aa12.97□□□□□ -0.33
COL1A1-208ENST00000494334 MAP1BP46821 2468 aaKnown RBP12.97□□□□□ -0.33
COL1A1-208ENST00000494334 LOC101059948A0A1B0GTJ6 334 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 SUPT3HB4E1H0 165 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 H0YGG7 62 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 UBXN8O00124 270 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 MAP2K7O14733 419 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 SUPT3HO75486 399 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 WDR47O94967 919 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 TUBBP07437 444 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 NUDT17P0C025 328 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 COL6A2P12110 1019 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
COL1A1-208ENST00000494334 RORAP35398 523 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 SLCO1A2P46721 670 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 GCGRP47871 477 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 HSPA7P48741 367 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 ARF3P61204 181 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-208ENST00000494334 ABHD18Q0P651 414 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 TCTE1Q5JU00 501 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 WASHC2DQ5SRD0 308 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 MANEAQ5SRI9 462 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CATSPEREQ5SY80 951 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 KLC3Q6P597 504 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 FAM199XQ6PEV8 388 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-208ENST00000494334 VASH2Q86V25 355 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 DSELQ8IZU8 1212 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CYP4X1Q8N118 509 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CNPY4Q8N129 248 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 OR2W6PQ8NHA6 318 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 EPS8L3Q8TE67 593 aaKnown RBP12.96□□□□□ -0.33
COL1A1-208ENST00000494334 SLC5A11Q8WWX8 675 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 NEIL2Q969S2 332 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CLIP3Q96DZ5 547 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CABS1Q96KC9 395 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 LRFN5Q96NI6 719 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 CCNL2Q96S94 520 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-208ENST00000494334 SLC7A5P2Q9GIP4 190 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 PPCSQ9HAB8 311 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 PADI1Q9ULC6 663 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 KCNE2Q9Y6J6 123 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 ANKRD12Q6UB98 2062 aa12.96□□□□□ -0.33
COL1A1-208ENST00000494334 PCM1Q15154 2024 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 FEZF1A0PJY2 475 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 FITM1A5D6W6 292 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 SMIM23A6NLE4 172 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 SYCE1LA8MT33 242 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 MEN1O00255 615 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 LCMT2O60294 686 aaKnown RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 STK16O75716 305 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 IPO13O94829 963 aaKnown RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 EIF2S1P05198 315 aaKnown RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 HBQ1P09105 142 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 RBP1P09455 135 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 STAT5AP42229 794 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 CCR8P51685 355 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 GRM7Q14831 915 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 RASA2Q15283 850 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 TSNAXIP1Q2TAA8 658 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 TECRLQ5HYJ1 363 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 BROXQ5VW32 411 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 ZNF385CQ66K41 422 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 LCN10Q6JVE6 187 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 RHBDD2Q6NTF9 364 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 ZNF517Q6ZMY9 492 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 MREGQ8N565 214 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 OR4K1Q8NGD4 311 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 TSNARE1Q96NA8 513 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 CNOT10Q9H9A5 744 aaKnown RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 RRAGDQ9NQL2 400 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
COL1A1-208ENST00000494334 ASB1Q9Y576 335 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 SPTBP11277 2137 aa12.95□□□□□ -0.34
COL1A1-208ENST00000494334 KCNE1BA0A087WTH5 132 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 A0A1W2PPM1 405 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 FOXO6A8MYZ6 492 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 GOLGA8RI6L899 631 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 TERTO14746 1132 aaKnown RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 KLK8O60259 260 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 KLK3P07288 261 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 LIFP15018 202 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 WT1P19544 449 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 F8A1P23610 371 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 AGTR2P50052 363 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 ARSFP54793 590 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 RPS15AP62244 130 aaKnown RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 MEF2AQ02078 507 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-208ENST00000494334 PRTGQ2VWP7 1150 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 C19orf48Q6RUI8 117 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 NXPE4Q6UWF7 544 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
COL1A1-208ENST00000494334 TMEM151AQ8N4L1 468 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms