RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 GALNT6Q8NCL4 622 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 SLC5A11Q8WWX8 675 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 RERGQ96A58 199 aaPredicted RBP11.95□□□□□ -0.5
TRA2A-209ENST00000494255 CLIP3Q96DZ5 547 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
TRA2A-209ENST00000494255 TMEM79Q9BSE2 394 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 CAPS2Q9BXY5 557 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 SPRTNQ9H040 489 aaPredicted RBP11.95□□□□□ -0.5
TRA2A-209ENST00000494255 MRPL46Q9H2W6 279 aaKnown RBP11.95□□□□□ -0.5
TRA2A-209ENST00000494255 SH2B3Q9UQQ2 575 aa11.95□□□□□ -0.5
TRA2A-209ENST00000494255 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 MAP2K7O14733 419 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CLGNO14967 610 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TAPBPO15533 448 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 KLK10O43240 276 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ZNF749O43361 778 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 SMIM24O75264 130 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 EIF2S1P05198 315 aaKnown RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 KLK3P07288 261 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 GSTA1P08263 222 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CCNYL3P0C7X3 344 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 MTHFD2P13995 350 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 GNAZP19086 355 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ALDH18A1P54886 795 aaKnown RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 RPS15AP62244 130 aaKnown RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CSNK1G2P78368 415 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CDC16Q13042 620 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 GRM7Q14831 915 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PDK4Q16654 411 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ST3GAL2Q16842 350 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 FBXO48Q5FWF7 155 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 BROXQ5VW32 411 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 FBXO42Q6P3S6 717 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 LRRC70Q7Z2Q7 622 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TMPRSS11BQ86T26 416 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 DTX1Q86Y01 620 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TTC29Q8NA56 475 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ABHD11Q8NFV4 315 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 MZB1Q8WU39 189 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 UBTD2Q8WUN7 234 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 NEIL2Q969S2 332 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 NDC1Q9BTX1 674 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CD244Q9BZW8 370 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 SPRY4Q9C004 299 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PELI2Q9HAT8 420 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TXLNGQ9NUQ3 528 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 GPRC5BQ9NZH0 403 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 XPR1Q9UBH6 696 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 OPTCQ9UBM4 332 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 DCDC2Q9UHG0 476 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 SRPK3Q9UPE1 567 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CEP295Q9C0D2 2601 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 A0A1W2PPM1 405 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 H0YGG7 62 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ARSFP54793 590 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CLN3Q13286 438 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 SETDB1Q15047 1291 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PFKFB4Q16877 469 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 WASHC2DQ5SRD0 308 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PRAMEF17Q5VTA0 474 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 YOD1Q5VVQ6 348 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 FRMPD2BQ6IN97 320 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TIPARPQ7Z3E1 657 aaKnown RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PLD3Q8IV08 490 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 SPACA3Q8IXA5 215 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 CYP4X1Q8N118 509 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 NKD1Q969G9 470 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ESAMQ96AP7 390 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 KIAA1143Q96AT1 154 aaPredicted RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ZNF285Q96NJ3 590 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 AIF1LQ9BQI0 150 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 NLNQ9BYT8 704 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 PADI1Q9ULC6 663 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 ANGPTL3Q9Y5C1 460 aa11.94□□□□□ -0.5
TRA2A-209ENST00000494255 TNPO3Q9Y5L0 923 aaKnown RBP11.94□□□□□ -0.5
TRA2A-209ENST00000494255 LOC105369274A0A096LPK9 316 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 LOC102723532A0A0G2JNH3 316 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 TEX51A0A1B0GUA7 166 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 TRBC2A0A5B9 178 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 H3BMH7 237 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 TXNDC9O14530 226 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 KLK8O60259 260 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 GLRA3O75311 464 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 H2AFYO75367 372 aaKnown RBP11.93□□□□□ -0.5
TRA2A-209ENST00000494255 CTSBP07858 339 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 TAC1P20366 129 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 AGTR2P50052 363 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 ABHD18Q0P651 414 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 TGIF1Q15583 401 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 FAM214AQ32MH5 1076 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 KRT71Q3SY84 523 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 CATSPEREQ5SY80 951 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 NXPE4Q6UWF7 544 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 OR4N4Q8N0Y3 316 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 CSNK1A1LQ8N752 337 aa11.93□□□□□ -0.5
TRA2A-209ENST00000494255 MR1Q95460 341 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms