RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 FAM189A2Q15884 450 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 KLHL26Q53HC5 615 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 C2orf27AQ580R0 203 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 BPIFB1Q8TDL5 484 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 CEP295NLQ96MC4 621 aa18.65■□□□□ 0.58
COL27A1-207ENST00000494090 DAPL1A0PJW8 107 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 BHMG1C9JSJ3 638 aaPredicted RBP18.64■□□□□ 0.58
COL27A1-207ENST00000494090 SEMG2Q02383 582 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 GPR17Q13304 367 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 TPRG1Q6ZUI0 275 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 PRSS58Q8IYP2 241 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 ACOT12Q8WYK0 555 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 OVCA2Q8WZ82 227 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 BIRC7Q96CA5 298 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 VRTNQ9H8Y1 702 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 PSAT1Q9Y617 370 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 C10orf71Q711Q0 1435 aa18.64■□□□□ 0.58
COL27A1-207ENST00000494090 H3BSA7 217 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 HCRTO43612 131 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 KDELR3O43731 214 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 MAGEA11P43364 429 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 XKP51811 444 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF678Q5SXM1 525 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 NAPRTQ6XQN6 538 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 MMAAQ8IVH4 418 aaKnown RBP18.64■□□□□ 0.57
COL27A1-207ENST00000494090 KLK6Q92876 244 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 ZUFSPQ96AP4 578 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 OR51V1Q9H2C8 321 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 ZNF726A6NNF4 738 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 E7ESA3 106 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 EMX2Q04743 252 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SP140Q13342 867 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 MS4A13Q5J8X5 152 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SLC29A4Q7RTT9 530 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 TAS1R3Q7RTX0 852 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 STX12Q86Y82 276 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 NR4A3Q92570 626 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CNDP2Q96KP4 475 aaKnown RBP18.64■□□□□ 0.57
COL27A1-207ENST00000494090 BTBD1Q9H0C5 482 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 NEUROD4Q9HD90 331 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SLC2A4RGQ9NR83 387 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 TDP1Q9NUW8 608 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SAP18O00422 153 aaKnown RBP18.64■□□□□ 0.57
COL27A1-207ENST00000494090 TBX1O43435 398 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 GBX2P52951 348 aaPredicted RBP18.64■□□□□ 0.57
COL27A1-207ENST00000494090 TSPAN5P62079 268 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CCL14Q16627 93 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SFT2D3Q587I9 215 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 SDHAF3Q9NRP4 125 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 ALKBH4Q9NXW9 302 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CLDND1Q9NY35 253 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 LOC100130705A0A1B0GUX0 176 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 VSTM5A8MXK1 200 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 PIRO00625 290 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 PRKCGP05129 697 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CXCR1P25024 350 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CDH15P55291 814 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 OR9I1Q8NGQ6 314 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 CCDC106Q9BWC9 280 aa18.64■□□□□ 0.57
COL27A1-207ENST00000494090 FAM172BPA6NC97 362 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 FZD9O00144 591 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 OAS1P00973 400 aaKnown RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 EBLN1P0CF75 366 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 FBXO43Q4G163 708 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 DCAF4L2Q8NA75 395 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 PYURFQ96I23 114 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 PFDN2Q9UHV9 154 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 WASHC1A8K0Z3 465 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 WASH3PC4AMC7 463 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 ITGA3P26006 1051 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 EMC10Q5UCC4 262 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 WASH2PQ6VEQ5 465 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 SMG8Q8ND04 991 aaKnown RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 KCNC2Q96PR1 638 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 MAGEE1Q9HCI5 957 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 KCNQ1P51787 676 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 ADAM8P78325 824 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 SMARCD3Q6STE5 483 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 SLC22A15Q8IZD6 547 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 C1orf52Q8N6N3 182 aaKnown RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 SLC22A14Q9Y267 594 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 KCTD3Q9Y597 815 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 LOC730098B7Z3J9 87 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 KMOO15229 486 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 PRAMEF11O60813 436 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 CFIP05156 583 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 G6PDP11413 515 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 AMZ1Q400G9 498 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 CRB2Q5IJ48 1285 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 NIPAL1Q6NVV3 410 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 SYVN1Q86TM6 617 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 IQCF2Q8IXL9 164 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 TP53INP1Q96A56 240 aa18.63■□□□□ 0.57
COL27A1-207ENST00000494090 AURKBQ96GD4 344 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 NLE1Q9NVX2 485 aaPredicted RBP18.63■□□□□ 0.57
COL27A1-207ENST00000494090 TGFB1P01137 390 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 CLUP10909 449 aa18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ARRB1P49407 418 aaPredicted RBP18.62■□□□□ 0.57
COL27A1-207ENST00000494090 ABHD18Q0P651 414 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms