RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SLC5A11Q8WWX8 675 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 FAM120BQ96EK7 910 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PRPF18Q99633 342 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 IKZF5Q9H5V7 419 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PIF1Q9H611 641 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 NDUFA13Q9P0J0 144 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 IGLON5A6NGN9 336 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 EVPLLA8MZ36 301 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 CXCR6O00574 342 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 SCAMP2O15127 329 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 KMOO15229 486 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 CLOCKO15516 846 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 TPST1O60507 370 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ERGP11308 486 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PCNAP12004 261 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 COX7A2P14406 83 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 TIA1P31483 386 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 HPCAL1P37235 193 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PIK3CBP42338 1070 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 DDX39BQ13838 428 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 STARD3Q14849 445 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 WSCD2Q2TBF2 565 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 NXPE4Q6UWF7 544 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 DNAJC14Q6Y2X3 702 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 MTSS1LQ765P7 747 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 LPCAT2Q7L5N7 544 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ZNF513Q8N8E2 541 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 TFAP2CQ92754 450 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 EGLN2Q96KS0 407 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 RNF145Q96MT1 663 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 EBPLQ9BY08 206 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 MRPS26Q9BYN8 205 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 REXO4Q9GZR2 422 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 SPATA7Q9P0W8 599 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 BTNL2Q9UIR0 455 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 OAZ3Q9UMX2 235 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 RNF103-CHMP3A0A140T963 221 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ARHGAP10A1A4S6 786 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ACOX3O15254 700 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 LINC01565O15544 149 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PCCBP05166 539 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 RPL3P39023 403 aaKnown RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 SLBPQ14493 270 aaKnown RBP eCLIP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 GTDC1Q4AE62 458 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ANXA8L1Q5VT79 327 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 OR4F3Q6IEY1 312 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ERICH5Q6P6B1 374 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 FAM83HQ6ZRV2 1179 aaPredicted RBP10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 VPS37AQ8NEZ2 397 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 FIG4Q92562 907 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 FAM131CQ96AQ9 280 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 RIPOR3Q96MK2 946 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 SPATA9Q9BWV2 254 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 EPB41L1Q9H4G0 881 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 CD320Q9NPF0 282 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PNPLA3Q9NST1 481 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ADGRE2Q9UHX3 823 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 ASF1AQ9Y294 204 aa10.42□□□□□ -0.74
PHACTR4-204ENST00000493669 PIPSLA2A3N6 862 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 FAM149AA5PLN7 773 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 SCN2BO60939 215 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PCDH8O95206 1070 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 SMIM18P0DKX4 95 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PPIBP23284 216 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 TRIM23P36406 574 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 RAE1P78406 368 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 MYBPC1Q00872 1141 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 DMPKQ09013 629 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 ADRM1Q16186 407 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PRAMEF14Q5SWL7 426 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PRAMEF13Q5VWM6 474 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 METRNLQ641Q3 311 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PARM1Q6UWI2 310 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 GCNT7Q6ZNI0 430 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 EID3Q8N140 333 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PGBD3Q8N328 593 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 C1orf52Q8N6N3 182 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 ST13P5Q8NFI4 369 aaPredicted RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 FGF14Q92915 247 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 FAM162AQ96A26 154 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PHF12Q96QT6 1004 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 SEPHS2Q99611 448 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 INPP5KQ9BT40 448 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PCBD2Q9H0N5 130 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 WDR26Q9H7D7 661 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 DMRT3Q9NQL9 472 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 DCAF13Q9NV06 445 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 ACSL5Q9ULC5 683 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 CORO2BQ9UQ03 480 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 TMEM98Q9Y2Y6 226 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 FPGTO14772 594 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 EPN2O95208 641 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 LRATO95237 230 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 ANXA4P09525 319 aaPredicted RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 KIR2DL1P43626 348 aaPredicted RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 WNT3P56703 355 aa10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 RPS13P62277 151 aaKnown RBP10.41□□□□□ -0.74
PHACTR4-204ENST00000493669 PLA2G4EQ3MJ16 856 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms