RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 IARS2Q9NSE4 1012 aaKnown RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 C20orf96Q9NUD7 363 aaPredicted RBP11.25□□□□□ -0.61
SRSF4-204ENST00000489898 TXLNGQ9NUQ3 528 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 ZNF451Q9Y4E5 1061 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 ABCA12Q86UK0 2595 aa11.25□□□□□ -0.61
SRSF4-204ENST00000489898 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 HYKKA2RU49 373 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 A6NL46 340 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 TCP11X1B4DZS4 312 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 C4orf51C9J302 202 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SEMA7AO75326 666 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 CATP04040 527 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 PAMP19021 973 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SLC26A3P40879 764 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 ARSFP54793 590 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 MRPL49Q13405 166 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 DSG2Q14126 1118 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 UBAP2LQ14157 1087 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 INPP5JQ15735 1006 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 PLEKHN1Q494U1 663 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 VWA2Q5GFL6 755 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 ZC3H12BQ5HYM0 836 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 PAQR3Q6TCH7 311 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SDCCAG8Q86SQ7 713 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 GALNT11Q8NCW6 608 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 EEF1AKMT1Q8WVE0 214 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 NACC2Q96BF6 587 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 C8orf44Q96CB5 159 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 TM4SF19Q96DZ7 209 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 CCDC138Q96M89 665 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 IP6K3Q96PC2 410 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 FAM167BQ9BTA0 163 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 MFRPQ9BY79 579 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SMYD2Q9NRG4 433 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 INTS7Q9NVH2 962 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 SAMD15Q9P1V8 674 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 C5AR2Q9P296 337 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 NDOR1Q9UHB4 597 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 VPS9D1Q9Y2B5 631 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 EML6Q6ZMW3 1958 aa11.24□□□□□ -0.61
SRSF4-204ENST00000489898 DIDO1Q9BTC0 2240 aaKnown RBP11.24□□□□□ -0.61
SRSF4-204ENST00000489898 LOC102723996A0A087X1L8 192 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 MAGEB16A2A368 324 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SMAPO00193 183 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 TTI1O43156 1089 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 STATHP02808 62 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 ZGLP1P0C6A0 271 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CMPK1P30085 196 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 ELK3P41970 407 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CARSP49589 748 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 RRADP55042 308 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CSNK1G2P78368 415 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SARNPP82979 210 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 FRG1Q14331 258 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SPANXN3Q5MJ09 141 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CSNK1A1LQ8N752 337 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 GRK7Q8WTQ7 553 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SKA2Q8WVK7 121 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SNRNP40Q96DI7 357 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 WDR77Q9BQA1 342 aaPredicted RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 SARGQ9BW04 601 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 TGIF2Q9GZN2 237 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 MRPS30Q9NP92 439 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CHMP2BQ9UQN3 213 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 MRFAP1Q9Y605 127 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 MAD1L1Q9Y6D9 718 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 COMMD10Q9Y6G5 202 aa11.23□□□□□ -0.61
SRSF4-204ENST00000489898 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 E5RI56 91 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 DPM1O60762 260 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 JRKO75564 520 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 KLHL18O94889 574 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 ZNF37AP17032 561 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 TCP1P17987 556 aaKnown RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 ALAS2P22557 587 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 BCL6P41182 706 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 RPL21P46778 160 aaKnown RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 SP140Q13342 867 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 ZNF460Q14592 562 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 MORF4L2Q15014 288 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 HP1BP3Q5SSJ5 553 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 PRAMEF13Q5VWM6 474 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 TMEM214Q6NUQ4 689 aaKnown RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 PRMT9Q6P2P2 845 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 TMEM205Q6UW68 189 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 KIAA0408Q6ZU52 694 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 UBE2R2Q712K3 238 aaPredicted RBP11.22□□□□□ -0.61
SRSF4-204ENST00000489898 HPS6Q86YV9 775 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 FAM26EQ8N5C1 309 aa11.22□□□□□ -0.61
SRSF4-204ENST00000489898 TTC29Q8NA56 475 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms