RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SULT2A1Q06520 285 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ARHGAP1Q07960 439 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 TAF10Q12962 218 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 KIR2DS3Q14952 304 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 DNAJC21Q5F1R6 531 aaKnown RBP3.96□□□□□ -1.78
XRN1-213ENST00000489241 LYSMD4Q5XG99 296 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 WBP2NLQ6ICG8 309 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ETFRF1Q6IPR1 90 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 SERPINA12Q8IW75 414 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 METTL27Q8N6F8 245 aaPredicted RBP3.96□□□□□ -1.78
XRN1-213ENST00000489241 POC1AQ8NBT0 407 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 KIAA0895Q8NCT3 520 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 OR1J1Q8NGS3 322 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CKAP2Q8WWK9 683 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 HSD17B8Q92506 261 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CD101Q93033 1021 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 PGM2Q96G03 612 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CDKN2AIPNLQ96HQ2 116 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 EPSTI1Q96J88 318 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 RUNDC3BQ96NL0 473 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CCDC3Q9BQI4 270 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ZNF559Q9BR84 538 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ACPTQ9BZG2 426 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 MIS12Q9H081 205 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ACTL8Q9H568 366 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 TXLNGQ9NUQ3 528 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 PKD2L2Q9NZM6 624 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ZDHHC2Q9UIJ5 367 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 CHKBQ9Y259 395 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 ITM2BQ9Y287 266 aa3.96□□□□□ -1.78
XRN1-213ENST00000489241 DHX29Q7Z478 1369 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 A0A0B4J203 849 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 A0A1W2PS18 150 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 SYCE3A1L190 88 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 CCDC69A6NI79 296 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 TMEM150CB9EJG8 249 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 CAPN9O14815 690 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 PRPSAP2O60256 369 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 DDHD2O94830 711 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 DLATP10515 647 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 MAPK3P27361 379 aaPredicted RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 ZNF132P52740 706 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 AKAP17AQ02040 695 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 KLC1Q07866 573 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 RBBP7Q16576 425 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 PHKG1Q16816 387 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 TTC31Q49AM3 519 aaPredicted RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 IFI44LQ53G44 452 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 PDSS1Q5T2R2 415 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 LRRC38Q5VT99 294 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 KCTD11Q693B1 232 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 OR4A47Q6IF82 309 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 ZNF770Q6IQ21 691 aaPredicted RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 ZNF554Q86TJ5 538 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 SLC9B2Q86UD5 537 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 PLD3Q8IV08 490 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 MAB21L3Q8N8X9 362 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 LMNTD1Q8N9Z9 388 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 CLEC1AQ8NC01 280 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 NEK11Q8NG66 645 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 SPATA13Q96N96 652 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 RASL10BQ96S79 203 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 NDNQ99608 321 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 FSD1Q9BTV5 496 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 XPO4Q9C0E2 1151 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 ZMYND12Q9H0C1 365 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 PRMT8Q9NR22 394 aaPredicted RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 MRPL17Q9NRX2 175 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 NINJ2Q9NZG7 142 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 HMG20BQ9P0W2 317 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 MAD2L2Q9UI95 211 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 NOCTQ9UK39 431 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 SLC7A7Q9UM01 511 aa3.95□□□□□ -1.78
XRN1-213ENST00000489241 RUVBL2Q9Y230 463 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 RPH3AQ9Y2J0 694 aaPredicted RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 TDRKHQ9Y2W6 561 aaKnown RBP3.95□□□□□ -1.78
XRN1-213ENST00000489241 TRIP12Q14669 1992 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 A0A1B0GUV1 79 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ANKRD61A6NGH8 418 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SLC9B1P1A6NJY1 282 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 C17orf105B2RV13 164 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 CCL24O00175 119 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 CACNB4O00305 520 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 STAM2O75886 525 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 KRT36O76013 467 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 BAG3O95817 575 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 IGHV4-39P01824 125 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SLC4A1P02730 911 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 F7P08709 466 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 SP9P0CG40 484 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 MSH3P20585 1137 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 CA4P22748 312 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 DGKAP23743 735 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 SSTR1P30872 391 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 FMO5P49326 533 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 LUMP51884 338 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 CDH11P55287 796 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 ERVFC1-1P60608 527 aa3.94□□□□□ -1.78
XRN1-213ENST00000489241 PITX1P78337 314 aaPredicted RBP3.94□□□□□ -1.78
XRN1-213ENST00000489241 GFPT1Q06210 699 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms