RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 EIF2S1P05198 315 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 HRH2P25021 359 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 ECHS1P30084 290 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 PMS2P54278 862 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 ZKSCAN8Q15776 578 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 GLE1Q53GS7 698 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 UBAP2Q5T6F2 1119 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 GRTP1Q5TC63 336 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 LCTLQ6UWM7 567 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 OVCH1Q7RTY7 1134 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 CTAGE3PQ8IX95 158 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 TTC29Q8NA56 475 aaPredicted RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 PYCR2Q96C36 320 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 ABHD17AQ96GS6 310 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 TRIM54Q9BYV2 358 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 TRIM55Q9BYV6 548 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 SLC25A18Q9H1K4 315 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 GPAMQ9HCL2 828 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 UTP6Q9NYH9 597 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 RUVBL1Q9Y265 456 aaKnown RBP15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 MAN2B2Q9Y2E5 1009 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 COL6A6A6NMZ7 2263 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 BSNQ9UPA5 3926 aa15.22■□□□□ 0.03
CTDSP1-209ENST00000488627 CFAP46Q8IYW2 2715 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 KCNE1BA0A087WTH5 132 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 NPEPPSL1A6NEC2 478 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 B8ZZF3 427 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 P2RX6O15547 441 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 PHGDHO43175 533 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 GUCA1CO95843 209 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 ALBP02768 609 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 UMODP07911 640 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 CCND1P24385 295 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 STX2P32856 288 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 OR1D4P47884 311 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 SNRPNP63162 240 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 USP10Q14694 798 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 SSPNQ14714 243 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 EFTUD2Q15029 972 aaKnown RBP eCLIP15.21■□□□□ 0.035e-14■■■■■ 29
CTDSP1-209ENST00000488627 HKDC1Q2TB90 917 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 CAPN13Q6MZZ7 669 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 VN1R4Q7Z5H5 301 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 SPATA6LQ8N4H0 392 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 CSNK1A1LQ8N752 337 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 PPM1NQ8N819 430 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 ABHD11Q8NFV4 315 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 OR2Y1Q8NGV0 311 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 FKBP10Q96AY3 582 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 TRIM44Q96DX7 344 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 FAM129AQ9BZQ8 928 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 DERL2Q9GZP9 239 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 SLC26A1Q9H2B4 701 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 NDOR1Q9UHB4 597 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 PADI2Q9Y2J8 665 aa15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 PTRH2Q9Y3E5 179 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-209ENST00000488627 BOD1L1Q8NFC6 3051 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 SPTA1P02549 2419 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 VSTM2BA6NLU5 285 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 K7EM74 188 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 LCMT2O60294 686 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 DNAJB5O75953 348 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 CD63P08962 238 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 ATXN8OSP0DMR3 200 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 SPRP35270 261 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 CDKL1Q00532 357 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 NFATC3Q12968 1075 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 NKG7Q16617 165 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 MUM1Q2TAK8 710 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 CPZQ66K79 652 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 ADCK2Q7Z695 626 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 C17orf64Q86WR6 236 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 METTL27Q8N6F8 245 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 OR4K1Q8NGD4 311 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 ATL1Q8WXF7 558 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 ALKBH8Q96BT7 664 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 PTERQ96BW5 349 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 TSPAN17Q96FV3 270 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 UBXN10Q96LJ8 280 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 SPSB2Q99619 263 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 HAUS8Q9BT25 410 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 NINJ2Q9NZG7 142 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 CTNNAL1Q9UBT7 734 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 GPN3Q9UHW5 284 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 TLK1Q9UKI8 766 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 OARD1Q9Y530 152 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 MAU2Q9Y6X3 613 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 FASNP49327 2511 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 TLN1Q9Y490 2541 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 FER1L5A0AVI2 2057 aa15.2■□□□□ 0.02
CTDSP1-209ENST00000488627 HMX2A2RU54 273 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 FOXS1O43638 330 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 CCDC166P0CW27 439 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 PIM1P11309 404 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 CDH1P12830 882 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 STMN1P16949 149 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 GMPRP36959 345 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 SLC12A2P55011 1212 aa15.19■□□□□ 0.02
CTDSP1-209ENST00000488627 RAB10P61026 200 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms