RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 CUEDC1Q9NWM3 386 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-219ENST00000488186 ACSL6Q9UKU0 697 aa15.1■□□□□ 0.01
C9orf3-219ENST00000488186 KLK4Q9Y5K2 254 aa15.1■□□□□ 0.01
C9orf3-219ENST00000488186 CDRT15L2A8MXV6 281 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 SRPX2O60687 465 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-219ENST00000488186 OR2B3O76000 313 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 MSL3P1P0C860 447 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 EZRP15311 586 aaKnown RBP15.09■□□□□ 0.01
C9orf3-219ENST00000488186 EPB42P16452 691 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 CD82P27701 267 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 PDK4Q16654 411 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 ZXDCQ2QGD7 858 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-219ENST00000488186 TBC1D25Q3MII6 688 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 CCDC153Q494R4 210 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 LRRC70Q7Z2Q7 622 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 TRABD2AQ86V40 505 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 PAQR7Q86WK9 346 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 PTGR2Q8N8N7 351 aaPredicted RBP15.09■□□□□ 0.01
C9orf3-219ENST00000488186 OR1L3Q8NH93 324 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 SNIP1Q8TAD8 396 aaKnown RBP15.09■□□□□ 0.01
C9orf3-219ENST00000488186 FGF11Q92914 225 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 FCRL4Q96PJ5 515 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 OR4K3Q96R72 315 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 TMEM79Q9BSE2 394 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 GPRC5BQ9NZH0 403 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 SENP1Q9P0U3 644 aa15.09■□□□□ 0.01
C9orf3-219ENST00000488186 IGKV1-8A0A0C4DH67 115 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 OR2A25A4D2G3 310 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 K7EPI3 171 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 TK2O00142 265 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 HAT1O14929 419 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 SCRG1O75711 98 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 MTHFD2P13995 350 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 CXCR2P25025 360 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 CRHR1P34998 444 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 AGTR2P50052 363 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 PCBP4P57723 403 aaKnown RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 VSX2P58304 361 aaPredicted RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 RPS15AP62244 130 aaKnown RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 SLC18A2Q05940 514 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 CASP8Q14790 479 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 SETDB1Q15047 1291 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 ZNF425Q6IV72 752 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 FBXO42Q6P3S6 717 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 TLDC1Q6P9B6 456 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 NXPE4Q6UWF7 544 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 HDXQ7Z353 690 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 TMPRSS11BQ86T26 416 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 KLHDC8AQ8IYD2 350 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 TEX9Q8N6V9 391 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 TTC29Q8NA56 475 aaPredicted RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 ZCCHC14Q8WYQ9 949 aaKnown RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 NEIL2Q969S2 332 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 ATP6V1E2Q96A05 226 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 AIF1LQ9BQI0 150 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 NLNQ9BYT8 704 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 SPRTNQ9H040 489 aaPredicted RBP15.08■□□□□ 0
C9orf3-219ENST00000488186 PELI2Q9HAT8 420 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 FOXJ2Q9P0K8 574 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 AP1M2Q9Y6Q5 423 aa15.08■□□□□ 0
C9orf3-219ENST00000488186 STMND1H3BQB6 276 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 TXNDC9O14530 226 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 OR1F1O43749 312 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 KLK8O60259 260 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 CTSVO60911 334 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 SPAG7O75391 227 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 STK17BO94768 372 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 KIAA0754O94854 1291 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 NTRK1P04629 796 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 HBQ1P09105 142 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 CCNYL3P0C7X3 344 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 C1GALT1C1LP0DN25 315 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 MYL2P10916 166 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 ATP5F1P24539 256 aaPredicted RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 EEF1DP29692 281 aaKnown RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 ARL1P40616 181 aaPredicted RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 PIK3CGP48736 1102 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 CSNK1G2P78368 415 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 MEF2AQ02078 507 aaPredicted RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 IRF8Q02556 426 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 RELAQ04206 551 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 RBBP5Q15291 538 aaKnown RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 HIST2H2ACQ16777 129 aaPredicted RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 XKR6Q5GH73 641 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 WASHC2DQ5SRD0 308 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 CATSPEREQ5SY80 951 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 HIST2H2AA3Q6FI13 130 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 PWWP2BQ6NUJ5 590 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 METTL2BQ6P1Q9 378 aaKnown RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 SH2D5Q6ZV89 423 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 ZFAND4Q86XD8 727 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 PLD3Q8IV08 490 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 SLC22A9Q8IVM8 553 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 KRT78Q8N1N4 520 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 ZNF655Q8N720 491 aaPredicted RBP15.07■□□□□ 0
C9orf3-219ENST00000488186 ABHD11Q8NFV4 315 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 PPP4R1Q8TF05 950 aa15.07■□□□□ 0
C9orf3-219ENST00000488186 UBTD2Q8WUN7 234 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms