RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 ZNF778Q96MU6 729 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 FRMD8P1Q9BZ68 369 aaPredicted RBP13.12□□□□□ -0.31
EPCAM-205ENST00000474691 RNF32Q9H0A6 362 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 GPAMQ9HCL2 828 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 CHRAC1Q9NRG0 131 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 PAK5Q9P286 719 aa13.12□□□□□ -0.31
EPCAM-205ENST00000474691 RUVBL2Q9Y230 463 aaKnown RBP13.12□□□□□ -0.31
EPCAM-205ENST00000474691 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
EPCAM-205ENST00000474691 R3HDM2Q9Y2K5 976 aaKnown RBP13.12□□□□□ -0.31
EPCAM-205ENST00000474691 DOCK10Q96BY6 2186 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 A0A0A6YYC8 382 aaPredicted RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 OR2A25A4D2G3 310 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 I3L1I5 382 aaPredicted RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 SLC19A2O60779 497 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 FTCDO95954 541 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 GRIA1P42261 906 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 BASP1P80723 227 aaKnown RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 ALDH6A1Q02252 535 aaKnown RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 HKDC1Q2TB90 917 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 RNF187Q5TA31 235 aaPredicted RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 FBXO42Q6P3S6 717 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 CHTF18Q8WVB6 975 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 PSMF1Q92530 271 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 C10orf90Q96M02 699 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 EBNA1BP2Q99848 306 aaKnown RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 IL22Q9GZX6 179 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 ZNF700Q9H0M5 742 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 KCNK13Q9HB14 408 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 TAC3Q9UHF0 121 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 PCYOX1Q9UHG3 505 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 DRG1Q9Y295 367 aaKnown RBP13.11□□□□□ -0.31
EPCAM-205ENST00000474691 KLK4Q9Y5K2 254 aa13.11□□□□□ -0.31
EPCAM-205ENST00000474691 NRP2O60462 931 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 MED26O95402 600 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 CELA2AP08217 269 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 EZRP15311 586 aaKnown RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 CD46P15529 392 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 ABOP16442 354 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 EEF1DP29692 281 aaKnown RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 SSTR2P30874 369 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 SLC26A3P40879 764 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 ACTN3Q08043 901 aaPredicted RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 SNX1Q13596 522 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 TTLL9Q3SXZ7 439 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 CEP97Q8IW35 865 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 LRRC57Q8N9N7 239 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 FAM136AQ96C01 138 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 UTP23Q9BRU9 249 aaKnown RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 TGIF2Q9GZN2 237 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 P2RY12Q9H244 342 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 CCDC68Q9H2F9 335 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 MARCH4Q9P2E8 410 aaPredicted RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 MYO7BQ6PIF6 2116 aa13.1□□□□□ -0.31
EPCAM-205ENST00000474691 PRRC2CQ9Y520 2896 aaKnown RBP13.1□□□□□ -0.31
EPCAM-205ENST00000474691 ITPR2Q14571 2701 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 LOC102723996A0A087X1L8 192 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 A0A1W2PPV9 198 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 KRT87PA6NCN2 255 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 LIASO43766 372 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 PAMP19021 973 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 AGAP20933 346 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 MST1P26927 711 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 NPY2RP49146 381 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 PNLIPRP1P54315 467 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 TAS2R50P59544 299 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 ABATP80404 500 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 MAT1AQ00266 395 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 OC90Q02509 493 aaPredicted RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 SRSF11Q05519 484 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 FAM53BQ14153 422 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 PCOLCEQ15113 449 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 MEP1AQ16819 746 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 ICE2Q659A1 982 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 CPEB2Q7Z5Q1 589 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 TMEM178AQ8NBL3 297 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 MTFMTQ96DP5 389 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 LACRTQ9GZZ8 138 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 KLHL1Q9NR64 748 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 VPS9D1Q9Y2B5 631 aa13.09□□□□□ -0.31
EPCAM-205ENST00000474691 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
EPCAM-205ENST00000474691 TCRBV7S2A1N4TA0A589 114 aa13.08□□□□□ -0.32
EPCAM-205ENST00000474691 SMAPO00193 183 aa13.08□□□□□ -0.32
EPCAM-205ENST00000474691 SEC24DO94855 1032 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms