RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 CCDC138Q96M89 665 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 OR2A5Q96R48 311 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 NAPGQ99747 312 aaPredicted RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 ACAT2Q9BWD1 397 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 ZNF552Q9H707 407 aaPredicted RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 PARVBQ9HBI1 364 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 CCDC177Q9NQR7 707 aaPredicted RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 IARS2Q9NSE4 1012 aaKnown RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 C14orf105Q9NVL8 296 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 TRMT1Q9NXH9 659 aaKnown RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
RTCB-202ENST00000463455 TAC3Q9UHF0 121 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 CDC23Q9UJX2 597 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 PLAAQ9Y263 795 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 SAR1BQ9Y6B6 198 aa11.35□□□□□ -0.59
RTCB-202ENST00000463455 DOPEY2Q9Y3R5 2298 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 MDC1Q14676 2089 aaKnown RBP11.34□□□□□ -0.59
RTCB-202ENST00000463455 PCSK5Q92824 1860 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 LOC105369274A0A096LPK9 316 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 LOC102723532A0A0G2JNH3 316 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 A0A1W2PQ72 361 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 KRT87PA6NCN2 255 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 SOCS6O14544 535 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 VPS4BO75351 444 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 MLLT10P55197 1068 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 DR1Q01658 176 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 CBLBQ13191 982 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 UBAP2LQ14157 1087 aaKnown RBP11.34□□□□□ -0.59
RTCB-202ENST00000463455 NDUFA9Q16795 377 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 KCTD19Q17RG1 926 aaPredicted RBP11.34□□□□□ -0.59
RTCB-202ENST00000463455 TUBB8Q3ZCM7 444 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 NADK2Q4G0N4 442 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 IRAK1BP1Q5VVH5 260 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 PRAMEF13Q5VWM6 474 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 SLC6A19Q695T7 634 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 UBE2R2Q712K3 238 aaPredicted RBP11.34□□□□□ -0.59
RTCB-202ENST00000463455 CREG2Q8IUH2 290 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 CPNE9Q8IYJ1 553 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 OR4N4Q8N0Y3 316 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 MYO1HQ8N1T3 1032 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 FAM26EQ8N5C1 309 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 CSNK1A1LQ8N752 337 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 RBMXL3Q8N7X1 1067 aaKnown RBP11.34□□□□□ -0.59
RTCB-202ENST00000463455 CABS1Q96KC9 395 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 SLC29A3Q9BZD2 475 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 TGIF2Q9GZN2 237 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 SLAMF7Q9NQ25 335 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 FBXL4Q9UKA2 621 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 VPS4AQ9UN37 437 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 B3GNT3Q9Y2A9 372 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 HS3ST3B1Q9Y662 390 aa11.34□□□□□ -0.59
RTCB-202ENST00000463455 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 SPENQ96T58 3664 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 A6NL46 340 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 ZGLP1P0C6A0 271 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 FBLP22087 321 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 FDXRP22570 491 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 OR1D4P47884 311 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 MMP16P51512 607 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 AP1S2P56377 157 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 ARL4CP56559 192 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 GNG11P61952 73 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 TSTA3Q13630 321 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 RBBP7Q16576 425 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 HIF1AQ16665 826 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 BBS9Q3SYG4 887 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 STEAP4Q687X5 459 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 KIRREL2Q6UWL6 708 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 IGFL2Q6UWQ7 119 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 PIWIL4Q7Z3Z4 852 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 ZADH2Q8N4Q0 377 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 Q8NA96 180 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 PPP4R1Q8TF05 950 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 COL26A1Q96A83 441 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 MIEF2Q96C03 454 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 CRB3Q9BUF7 120 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 SLC6A16Q9GZN6 736 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 DRC3Q9H069 523 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 STOX2Q9P2F5 926 aaPredicted RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 RUVBL1Q9Y265 456 aaKnown RBP11.33□□□□□ -0.6
RTCB-202ENST00000463455 TEX264Q9Y6I9 313 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 SHANK1Q9Y566 2161 aa11.33□□□□□ -0.6
RTCB-202ENST00000463455 CNTRLQ7Z7A1 2325 aa11.32□□□□□ -0.6
RTCB-202ENST00000463455 SPTAN1Q13813 2472 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms