RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MAGEC3Q8TD91 643 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 MMABQ96EY8 250 aaPredicted RBP10.28□□□□□ -0.76
CBX3-205ENST00000462165 SCMH1Q96GD3 660 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 ZNF778Q96MU6 729 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 PANX3Q96QZ0 392 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 TREX2Q9BQ50 279 aaPredicted RBP10.28□□□□□ -0.76
CBX3-205ENST00000462165 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 DPH7Q9BTV6 452 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 SYNPO2LQ9H987 977 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 SPATA7Q9P0W8 599 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 TTC7AQ9ULT0 858 aaPredicted RBP10.28□□□□□ -0.76
CBX3-205ENST00000462165 TFR2Q9UP52 801 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 HCFC1P51610 2035 aa10.28□□□□□ -0.76
CBX3-205ENST00000462165 KRT87PA6NCN2 255 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ASPDHA6ND91 283 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ERI2A8K979 691 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 FAM227AF5H4B4 570 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 CYC1P08574 325 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 C8orf89P0DMQ9 161 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ERGP11308 486 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ADRA1DP25100 572 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ANP32AP39687 249 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 GDF10P55107 478 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 CSNK1G2P78368 415 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 LSM11P83369 360 aaKnown RBP eCLIP10.27□□□□□ -0.77
CBX3-205ENST00000462165 ALDH6A1Q02252 535 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 FAM53BQ14153 422 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 FASTKQ14296 549 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 SYT16Q17RD7 645 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 AARS2Q5JTZ9 985 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 ACER2Q5QJU3 275 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 LRRC8BQ6P9F7 803 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 PAQR7Q86WK9 346 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ZC3H7AQ8IWR0 971 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 CSNK1A1LQ8N752 337 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 DNAAF3Q8N9W5 541 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 MDS2Q8NDY4 140 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 OR6P1Q8NGX9 317 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 PHF10Q8WUB8 498 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 METTL21AQ8WXB1 218 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 PEX13Q92968 403 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 POM121Q96HA1 1249 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 ZNF354BQ96LW1 612 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 SIGLEC12Q96PQ1 595 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 OR2A5Q96R48 311 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 DRC3Q9H069 523 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 MRPS30Q9NP92 439 aaKnown RBP10.27□□□□□ -0.77
CBX3-205ENST00000462165 ANAPC5Q9UJX4 755 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 MKL2Q9ULH7 1088 aa10.27□□□□□ -0.77
CBX3-205ENST00000462165 A0A0A6YYC8 382 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 IGKV1-8A0A0C4DH67 115 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 A0A0U1RQJ8 604 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 GOLGA6L9A6NEM1 432 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 A8MUI8 341 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 AKR1B15C9JRZ8 316 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 I3L1I5 382 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 TXNDC9O14530 226 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 KPNA5O15131 536 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 SEC24DO94855 1032 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 SUN1O94901 812 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 GAS8O95995 478 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 CD1EP15812 388 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 TTPAP49638 278 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 PRAMEP78395 509 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 TUBA3CQ13748 450 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 BTBD16Q32M84 506 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 PTRHD1Q6GMV3 140 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 TUBA3EQ6PEY2 450 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 MEX3BQ6ZN04 569 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 NCCRP1Q6ZVX7 275 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 OTOAQ7RTW8 1153 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 CPEB2Q7Z5Q1 589 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 LDB1Q86U70 411 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 SIAH3Q8IW03 269 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 BEST3Q8N1M1 668 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 TMEM178AQ8NBL3 297 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 SKA2Q8WVK7 121 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 ALG3Q92685 438 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 CALR3Q96L12 384 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 FOPNLQ96NB1 174 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 FRMD6Q96NE9 622 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 CYTH2Q99418 400 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 ACAT2Q9BWD1 397 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 HES7Q9BYE0 225 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 TSPAN10Q9H1Z9 355 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 P2RY12Q9H244 342 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 GNPTGQ9UJJ9 305 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 RUVBL2Q9Y230 463 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 R3HDM2Q9Y2K5 976 aaKnown RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 NEU2Q9Y3R4 380 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 TCAF1Q9Y4C2 921 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 PCDHA13Q9Y5I0 950 aa10.26□□□□□ -0.77
CBX3-205ENST00000462165 MAP1AP78559 2803 aaPredicted RBP10.26□□□□□ -0.77
CBX3-205ENST00000462165 SCN3AQ9NY46 2000 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 IGHV3-20A0A0C4DH32 117 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 NPIPA5E9PKD4 350 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 E9PLN8 166 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 FANCGO15287 622 aa10.25□□□□□ -0.77
CBX3-205ENST00000462165 CD3EAPO15446 510 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms