RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 TPT1P8Q9HAU6 139 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 BRD7Q9NPI1 651 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 FAM53CQ9NYF3 392 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RGS17Q9UGC6 210 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GPN3Q9UHW5 284 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SLC38A8A6NNN8 435 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 KMOO15229 486 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SLITRK5O94991 958 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CFHP08603 1231 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PGAM2P15259 253 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GGT5P36269 586 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 WASP42768 502 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ATP4BP51164 291 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 RABGGTBP53611 331 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 OR12D2P58182 307 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 CAP1Q01518 475 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 EMX2Q04743 252 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF630Q2M218 657 aaPredicted RBP7.58□□□□□ -1.2
NEDD9-204ENST00000448183 SPANXN4Q5MJ08 99 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 C1orf189Q5VU69 101 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 AMZ2Q86W34 360 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 PHC2Q8IXK0 858 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 GHDCQ8N2G8 530 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TRPM4Q8TD43 1214 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 TWNKQ96RR1 684 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 WACQ9BTA9 647 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 NUDT15Q9NV35 164 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 MTMR10Q9NXD2 777 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 ZNF69Q9UC07 566 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 IFT172Q9UG01 1749 aa7.58□□□□□ -1.2
NEDD9-204ENST00000448183 LCHNA4D1U4 455 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 H0YAE9 185 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 DNAJB5O75953 348 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 APOL3O95236 402 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PRKACGP22612 351 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 CDH11P55287 796 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 RPS24P62847 133 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 OGDHQ02218 1023 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PLPP4Q5VZY2 271 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TREML1Q86YW5 311 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 MCEMP1Q8IX19 187 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 AQP11Q8NBQ7 271 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 OR5AK3PQ8NH89 298 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 THAP6Q8TBB0 222 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 ITFG2Q969R8 447 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 KIAA1191Q96A73 305 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SLC45A3Q96JT2 553 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 RIPOR3Q96MK2 946 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 BCAS3Q9H6U6 928 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 WRAP73Q9P2S5 460 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SLC2A6Q9UGQ3 507 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 HCN2Q9UL51 889 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 MANBAO00462 879 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PLSCR1O15162 318 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TLX2O43763 284 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 DIRAS1O95057 198 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 CLIC3O95833 236 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 RB1P06400 928 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PABPC4LP0CB38 370 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 EPCAMP16422 314 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 S100A2P29034 98 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 IL12BP29460 328 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 GRK5P34947 590 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 CCR8P51685 355 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SP140Q13342 867 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PAFAH1B3Q15102 231 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TOR1AIP1Q5JTV8 583 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TCEAL6Q6IPX3 200 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 NCEH1Q6PIU2 408 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 XKRXQ6PP77 449 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PIM3Q86V86 326 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 IFNLR1Q8IU57 520 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 ARMC5Q96C12 935 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SCGB3A2Q96PL1 93 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 ALPK1Q96QP1 1244 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 LPIN3Q9BQK8 851 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TMED9Q9BVK6 235 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 B3GNT4Q9C0J1 378 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 DERL2Q9GZP9 239 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 BTBD1Q9H0C5 482 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 OR2AG1Q9H205 316 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 MRPS30Q9NP92 439 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 A0A0G2JN53 185 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SOWAHBA6NEL2 793 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 FAM170BA6NMN3 283 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 LOC730098B7Z3J9 87 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 PSMD9O00233 223 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 DUSP11O75319 330 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 BCHEP06276 602 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 F7P08709 466 aaPredicted RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 EDNRAP25101 427 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 FLT3LGP49771 235 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 RPS3AP61247 264 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 FKBP1BP68106 108 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SLC13A2Q13183 592 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 TIGD5Q53EQ6 642 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 FBXL22Q6P050 247 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 SLC15A3Q8IY34 581 aa7.57□□□□□ -1.2
NEDD9-204ENST00000448183 LSM14AQ8ND56 463 aaKnown RBP7.57□□□□□ -1.2
NEDD9-204ENST00000448183 KCTD13Q8WZ19 329 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms