RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 REPS1Q96D71 796 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 PRAP1Q96NZ9 151 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 FRG2BQ96QU4 278 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 AIF1LQ9BQI0 150 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 PLCD4Q9BRC7 762 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 PITHD1Q9GZP4 211 aaPredicted RBP22.14■■□□□ 1.13
CPSF4-204ENST00000436336 TMEM184CQ9NVA4 438 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 ZNF490Q9ULM2 529 aaPredicted RBP22.14■■□□□ 1.13
CPSF4-204ENST00000436336 PCDHGB2Q9Y5G2 931 aa22.14■■□□□ 1.13
CPSF4-204ENST00000436336 CACNA1HO95180 2353 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 IGKV1-8A0A0C4DH67 115 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 PROS1P07225 676 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 TYRP1P17643 537 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 EPHA3P29320 983 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 CAPZBP47756 277 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 ABRAXAS2Q15018 415 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 SUZ12Q15022 739 aaKnown RBP22.13■■□□□ 1.13
CPSF4-204ENST00000436336 NR0B2Q15466 257 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 ACAD11Q709F0 780 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 LAS2Q8IYD9 372 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 WDR20Q8TBZ3 569 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 SELENOMQ8WWX9 145 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 ATOH1Q92858 354 aaPredicted RBP22.13■■□□□ 1.13
CPSF4-204ENST00000436336 RILPQ96NA2 401 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 WDR55Q9H6Y2 383 aaPredicted RBP22.13■■□□□ 1.13
CPSF4-204ENST00000436336 SLC6A20Q9NP91 592 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 TCF7L2Q9NQB0 619 aa22.13■■□□□ 1.13
CPSF4-204ENST00000436336 DNAAF2Q9NVR5 837 aaKnown RBP22.13■■□□□ 1.13
CPSF4-204ENST00000436336 DMDP11532 3685 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 MDC1Q14676 2089 aaKnown RBP22.12■■□□□ 1.13
CPSF4-204ENST00000436336 LINC00032P0C843 101 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 PNLIPP16233 465 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 CSNK1G2P78368 415 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 XKR7Q5GH72 579 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 C10orf62Q5T681 223 aaPredicted RBP22.12■■□□□ 1.13
CPSF4-204ENST00000436336 KIAA1614Q5VZ46 1190 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 SPESP1Q6UW49 350 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 C3orf30Q96M34 536 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 DPH7Q9BTV6 452 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 CCDC28BQ9BUN5 200 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 SPNS1Q9H2V7 528 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 EPB41L1Q9H4G0 881 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 SNX7Q9UNH6 387 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 PTGDR2Q9Y5Y4 395 aa22.12■■□□□ 1.13
CPSF4-204ENST00000436336 GOLGA8QA0A0J9YX86 632 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 SERTM1A2A2V5 107 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 GOLGA8OA6NCC3 632 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 GOLGA8NF8WBI6 632 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 PDYNP01213 254 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 REEP5Q00765 189 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 MEF2AQ02078 507 aaPredicted RBP22.11■■□□□ 1.13
CPSF4-204ENST00000436336 TUBB3Q13509 450 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 NAA25Q14CX7 972 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 SCIMPQ6UWF3 145 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 TMIGD1Q6UXZ0 262 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 TRIM46Q7Z4K8 759 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 ADCK2Q7Z695 626 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 FAM20CQ8IXL6 584 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 OR7G3Q8NG95 312 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 ACTRT2Q8TDY3 377 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 OR52B2Q96RD2 323 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 NT5DC2Q9H857 520 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 FARSBQ9NSD9 589 aaKnown RBP22.11■■□□□ 1.13
CPSF4-204ENST00000436336 POMT2Q9UKY4 750 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 TSC22D4Q9Y3Q8 395 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 SLC28A1O00337 649 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 VPS4BO75351 444 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 ZNF425Q6IV72 752 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 CEP70Q8NHQ1 597 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 MTFMTQ96DP5 389 aaKnown RBP22.11■■□□□ 1.13
CPSF4-204ENST00000436336 RAB33BQ9H082 229 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 RIC8BQ9NVN3 520 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 ANKMY1Q9P2S6 941 aa22.11■■□□□ 1.13
CPSF4-204ENST00000436336 COL5A1P20908 1838 aaPredicted RBP22.1■■□□□ 1.13
CPSF4-204ENST00000436336 LY6G6EA0A0G2JKS1 128 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 ATP6AP2A0A1C7CYW4 349 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 ATP6AP2O75787 350 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 MYF5P13349 255 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 ALDH4A1P30038 563 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 GRK3P35626 688 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 GRIA3P42263 894 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 LSM12Q3MHD2 195 aaKnown RBP22.1■■□□□ 1.13
CPSF4-204ENST00000436336 SGO1Q5FBB7 561 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 DBX2Q6ZNG2 339 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 LARP4Q71RC2 724 aaKnown RBP eCLIP22.1■■□□□ 1.13
CPSF4-204ENST00000436336 ZNF740Q8NDX6 193 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 HBEGFQ99075 208 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 KCNH6Q9H252 994 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 HEY2Q9UBP5 337 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 KLK4Q9Y5K2 254 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 U3KQA8 63 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 MYO15AQ9UKN7 3530 aa22.1■■□□□ 1.13
CPSF4-204ENST00000436336 IGHV1OR21-1A0A087WYE8 117 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 A0A0J9YY10 115 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 ZW10O43264 779 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 TNFSF14O43557 240 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 RGS14O43566 566 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 PCNAP12004 261 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 NBL1P41271 181 aa22.09■■□□□ 1.13
CPSF4-204ENST00000436336 NEK2P51955 445 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms