RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FRG2Q64ET8 278 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PDE12Q6L8Q7 609 aaKnown RBP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 AGTRAPQ6RW13 159 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ANKFN1Q8N957 763 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 FRG2BQ96QU4 278 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 NEURL2Q9BR09 285 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PPT2Q9UMR5 302 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ASF1AQ9Y294 204 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 WDR37Q9Y2I8 494 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 MGAT4DA6NG13 374 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 H3BM21 787 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ALPPL2P10696 532 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 TIMP2P16035 220 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 MYF6P23409 242 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 IL5RAQ01344 420 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 FPGSQ05932 587 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PARS2Q7L3T8 475 aaKnown RBP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ASZ1Q8WWH4 475 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 BDH2Q9BUT1 245 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 AGPAT4Q9NRZ5 378 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ZIM2Q9NZV7 527 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 BAG5Q9UL15 447 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 RECQL5O94762 991 aaPredicted RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 PCCBP05166 539 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 CA3P07451 260 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 BMP2P12643 396 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 AGXTP21549 392 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 OPRL1P41146 370 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 CRATP43155 626 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 SOX9P48436 509 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 PWP1Q13610 501 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 THOC6Q86W42 341 aaKnown RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 MRPL43Q8N983 215 aaKnown RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 SPPL2AQ8TCT8 520 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 DOK4Q8TEW6 326 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 UBE2FQ969M7 185 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 SH2B3Q9UQQ2 575 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 G3V2T6 193 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 DLGAP1O14490 977 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 FPGTO14772 594 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 SOCS5O75159 536 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 HSD17B1P14061 328 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 CCT8P50990 548 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 NKX2-5P52952 324 aaPredicted RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 RPS13P62277 151 aaKnown RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 RPS26P62854 115 aaKnown RBP15.08■□□□□ 0
SCARF1-203ENST00000434376 MTA1Q13330 715 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 CDKN3Q16667 212 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 GPR33Q49SQ1 333 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 ADGRD2Q7Z7M1 963 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 PDPRQ8NCN5 879 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 TANKQ92844 425 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 LHPPQ9H008 270 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 SLC52A3Q9NQ40 469 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
SCARF1-203ENST00000434376 SNX6Q9UNH7 406 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 SCN2AQ99250 2005 aa15.08■□□□□ 0
SCARF1-203ENST00000434376 CABIN1Q9Y6J0 2220 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 KRBA1A5PL33 1030 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 DEAF1O75398 565 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 ANXA4P09525 319 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 CD22P20273 847 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 FSHRP23945 695 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 AOAHP28039 575 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 KIR3DL1P43629 444 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 MLLT10P55197 1068 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 MOGQ16653 247 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 PAGE2BQ5JRK9 111 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 Q6ZPB1 254 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 NANOGNBQ7Z5D8 188 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 GLMNQ92990 594 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 RSPRY1Q96DX4 576 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 SLC6A17Q9H1V8 727 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 DYRK4Q9NR20 520 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 SCHIP1Q9P0W5 487 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 IL36AQ9UHA7 158 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 FNDC1Q4ZHG4 1894 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 SYNDIG1LA6NDD5 238 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 AQP12BA6NM10 295 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 WASHC1A8K0Z3 465 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 EVPLLA8MZ36 301 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 M0R129 80 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 ENO2P09104 434 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 ENGP17813 658 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 PTNP21246 168 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 SHMT2P34897 504 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 PPM1FP49593 454 aaPredicted RBP15.07■□□□□ 0
SCARF1-203ENST00000434376 SLC7A9P82251 487 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 LCN8Q6JVE9 175 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 NOXRED1Q6NXP6 359 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 WASH2PQ6VEQ5 465 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 OLIG3Q7RTU3 272 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 AQP12AQ8IXF9 295 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 MSRB3Q8IXL7 192 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 TOR3AQ9H497 397 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 TRIM39Q9HCM9 518 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 ABCD2Q9UBJ2 740 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 RIMKLBQ9ULI2 386 aa15.07■□□□□ 0
SCARF1-203ENST00000434376 MAP4K5Q9Y4K4 846 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms