RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 BPIP17213 487 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 DEFB103AP81534 67 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 SLC14A1Q13336 389 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 CAMK2BQ13554 666 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 MAD2L1BPQ15013 274 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 NDUFA5Q16718 116 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 TPRG1LQ5T0D9 272 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 CAPN13Q6MZZ7 669 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 PRSS48Q7RTY5 328 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 ZNF551Q7Z340 670 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 ST13P5Q8NFI4 369 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 LILRB4Q8NHJ6 448 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 SKA2Q8WVK7 121 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 ALG14Q96F25 216 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 REXO4Q9GZR2 422 aaKnown RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 C14orf119Q9NWQ9 140 aa16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 PDP1Q9P0J1 537 aaPredicted RBP16.37■□□□□ 0.21
PCDH8P1-201ENST00000428983 M0R082 166 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 FZD6O60353 706 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 GREM1O60565 184 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 MFN2O95140 757 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 GABRR2P28476 465 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 HMGCLP35914 325 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 PTGER3P43115 390 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 NOGQ13253 232 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 IL18R1Q13478 541 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 POM121L1PQ3SYA9 428 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 SHQ1Q6PI26 577 aaKnown RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 VTCN1Q7Z7D3 282 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 SETD9Q8NE22 299 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 DNASE1L2Q92874 299 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 FAM120BQ96EK7 910 aaKnown RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 DPY30Q9C005 99 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 SIRT5Q9NXA8 310 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 SNX6Q9UNH7 406 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 DHRS7Q9Y394 339 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 CCL27Q9Y4X3 112 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 N6AMT1Q9Y5N5 214 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 VIPP01282 170 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 NTRK1P04629 796 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 EIF2S1P05198 315 aaKnown RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 HOXB8P17481 243 aaPredicted RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 CRISP3P54108 245 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 PLEKHG6Q3KR16 790 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 ZC3H12BQ5HYM0 836 aaKnown RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 CMTM8Q8IZV2 173 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 CDADC1Q9BWV3 514 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 MRPL9Q9BYD2 267 aaKnown RBP16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 UGT2A1Q9Y4X1 527 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 CHD9Q3L8U1 2897 aa16.36■□□□□ 0.21
PCDH8P1-201ENST00000428983 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ISPDA4D126 451 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 NPIPB15A6NHN6 443 aaPredicted RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ABLIM3O94929 683 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CXCR2P25025 360 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 HOXD10P28358 340 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CDKN2CP42773 168 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CACNG1Q06432 222 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ARHGEF7Q14155 803 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CLPPQ16740 277 aaPredicted RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ZNF181Q2M3W8 571 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 NXNL2Q5VZ03 156 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 GAREM2Q75VX8 874 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 GPR26Q8NDV2 337 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 DMRTB1Q96MA1 342 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ZBTB18Q99592 522 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 TSEN34Q9BSV6 310 aaKnown RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 TBC1D14Q9P2M4 693 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 HOXC11O43248 304 aaPredicted RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 IDH3BO43837 385 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 SH3BGRLO75368 114 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 ESR1P03372 595 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 COL6A1P12109 1028 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 NRIP1P48552 1158 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 LMAN2Q12907 356 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 NFATC2Q13469 925 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CPSF6Q16630 551 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 RFX4Q33E94 735 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 KDM4DQ6B0I6 523 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CHST9Q7L1S5 443 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 KIAA1958Q8N8K9 716 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 IL17RDQ8NFM7 739 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 APH1BQ8WW43 257 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 TMEM169Q96HH4 297 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 Q96MT0 163 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 MMP27Q9H306 513 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 C1orf109Q9NX04 203 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CFAP97Q9P2B7 532 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 CRLS1Q9UJA2 301 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 RIMKLBQ9ULI2 386 aa16.35■□□□□ 0.21
PCDH8P1-201ENST00000428983 A0A1W2PRU2 124 aa16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 KMOO15229 486 aa16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 SEC22BO75396 215 aa16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 RETP07949 1114 aa16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 BCL2L1Q07817 233 aa16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 ZNF648Q5T619 568 aaPredicted RBP16.34■□□□□ 0.21
PCDH8P1-201ENST00000428983 C2orf15Q8WU43 125 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms