RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 SEMA6CQ9H3T2 930 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 LRRN3Q9H3W5 708 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 EHD1Q9H4M9 534 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ELOVL6Q9H5J4 265 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TNFRSF12AQ9NP84 129 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 PNPOQ9NVS9 261 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 GEMIN8Q9NWZ8 242 aaKnown RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRPS1Q9UHF7 1281 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ADAM21Q9UKJ8 722 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 SNX7Q9UNH6 387 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 BTRCQ9Y297 605 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 RNF11Q9Y3C5 154 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRAF6Q9Y4K3 522 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 KNL1Q8NG31 2342 aa7.61□□□□□ -1.19
HMGA1P4-201ENST00000428643 MN1Q10571 1320 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZFHX2Q9C0A1 2572 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 KCNE1BA0A087WTH5 132 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 IGKV1-8A0A0C4DH67 115 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 A0A1W2PQM1 296 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GMNCA6NCL1 334 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLC9B1P1A6NJY1 282 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 D6RAR5 112 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CASC3O15234 703 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 MAP3K7O43318 606 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 NRP2O60462 931 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRAMEF4O60810 478 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 EDF1O60869 148 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CBFA2T3O75081 653 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SKAP2O75563 359 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 RFPL3O75679 317 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 KRT6AP02538 564 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 KRT6BP04259 564 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GP1BAP07359 652 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TROVE2P10155 538 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 UROSP10746 265 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 JUPP14923 745 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ST6GAL1P15907 406 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CD22P20273 847 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 HRH2P25021 359 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CXCR2P25025 360 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 HNF4AP41235 474 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GRIA3P42263 894 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 MLLT3P42568 568 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 LSSP48449 732 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 KRT6CP48668 564 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 RPL14P50914 215 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SEC24CP53992 1094 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 FOXA1P55317 472 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CYP4F2P78329 520 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PHEXP78562 749 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GALNT1Q10472 559 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SF3A3Q12874 501 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 LAPTM5Q13571 262 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SPIDRQ14159 915 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 RBBP5Q15291 538 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PDCD2Q16342 344 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 HIST2H2ACQ16777 129 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GGTA1PQ4G0N0 100 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TCHHL1Q5QJ38 904 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PHF19Q5T6S3 580 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 CACHD1Q5VU97 1274 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRAMEF9Q5VWM5 478 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 LIPJQ5W064 366 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 KANK2Q63ZY3 851 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 FRG2Q64ET8 278 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 HIST2H2AA3Q6FI13 130 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 MED27Q6P2C8 311 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 WDR74Q6RFH5 385 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TMIGD1Q6UXZ0 262 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ATG14Q6ZNE5 492 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PAQR7Q86WK9 346 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAM129CQ86XR2 697 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PLD3Q8IV08 490 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 DDIASQ8IXT1 998 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 L3MBTL4Q8NA19 623 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZNF740Q8NDX6 193 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 DEFB124Q8NES8 71 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 NETO1Q8TDF5 533 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TWIST2Q8WVJ9 160 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 UBE2E3Q969T4 207 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 REPS1Q96D71 796 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 WDR34Q96EX3 536 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 THOC1Q96FV9 657 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PPP1R36Q96LQ0 422 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZNF317Q96PQ6 595 aaPredicted RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 FRG2BQ96QU4 278 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 GFM1Q96RP9 751 aaKnown RBP7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 HBEGFQ99075 208 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 DPYSL5Q9BPU6 564 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 PLCD4Q9BRC7 762 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 NTMT1Q9BV86 223 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TWSG1Q9GZX9 223 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 RABEP2Q9H5N1 569 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 NPHS2Q9NP85 383 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 TMEM9Q9P0T7 183 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ANKMY1Q9P2S6 941 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 EPHA6Q9UF33 1036 aa7.6□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZDHHC2Q9UIJ5 367 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms