RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 KIRREL3Q8IZU9 778 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MREGQ8N565 214 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FADS6Q8N9I5 356 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MOSPD2Q8NHP6 518 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RNASE11Q8TAA1 199 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FBXO30Q8TB52 745 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CRYGNQ8WXF5 182 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZBED6CLQ96FA7 236 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 INPP4AQ96PE3 977 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NUDT9Q9BW91 350 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PRDM14Q9GZV8 571 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TKTL2Q9H0I9 626 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MMADHCQ9H3L0 296 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SUV39H2Q9H5I1 410 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 DNAJB4Q9UDY4 337 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NOCTQ9UK39 431 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ACTL7AQ9Y615 435 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MAU2Q9Y6X3 613 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FBP2O00757 339 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 VILLO15195 856 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZFAND5O76080 213 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 HLA-DQA2P01906 255 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PNMA6AP0CW24 399 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GLB1P16278 677 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PECAM1P16284 738 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GTF2H1P32780 548 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MLLT10P55197 1068 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RPS16P62249 146 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GGTLC2Q14390 218 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NFATC4Q14934 902 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MAPK14Q16539 360 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 NFIL3Q16649 462 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GPRC6AQ5T6X5 926 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CAPN13Q6MZZ7 669 aaPredicted RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 TAPT1Q6NXT6 567 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 B3GNT6Q6ZMB0 384 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MACC1Q6ZN28 852 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 LINC00299Q6ZSB3 139 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 MLKLQ8NB16 471 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 GSTCDQ8NEC7 633 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CXorf38Q8TB03 319 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 FAM81AQ8TBF8 368 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 C16orf58Q96GQ5 468 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ADGRG7Q96K78 797 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RPL10LQ96L21 214 aaKnown RBP3.44□□□□□ -1.86
TOP2A-201ENST00000423485 HSFY1Q96LI6 401 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF597Q96LX8 424 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 OCSTAMPQ9BR26 566 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 RUSC1Q9BVN2 902 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CEP44Q9C0F1 390 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PDE11AQ9HCR9 933 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 HCFC1R1Q9NWW0 138 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 PSMD13Q9UNM6 376 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 N6AMT1Q9Y5N5 214 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 CACNG2Q9Y698 323 aa3.44□□□□□ -1.86
TOP2A-201ENST00000423485 SEC16AO15027 2179 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MYOFQ9NZM1 2061 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 A0A1W2PPC4 97 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 C2orf72A6NCS6 295 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZSCAN9O15535 394 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 EFSO43281 561 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 RAF1P04049 648 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SPATA31C1P0DKV0 1188 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 NQO1P15559 274 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 PTPN6P29350 595 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CASP1P29466 404 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SPAM1P38567 509 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 P2RY2P41231 377 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 HSD11B2P80365 405 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DOC2AQ14183 400 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ISXQ2M1V0 245 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FAM98BQ52LJ0 330 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CDKL4Q5MAI5 379 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FAM182AQ5T1J6 154 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 IER5LQ5T953 404 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 INTS11Q5TA45 600 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 NOXRED1Q6NXP6 359 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CCDC80Q76M96 950 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 DAGLBQ8NCG7 672 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 OR51D1Q8NGF3 324 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 LRRC8CQ8TDW0 803 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ANKRD49Q8WVL7 239 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 OTULINQ96BN8 352 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF845Q96IR2 970 aaPredicted RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CCSER1Q9C0I3 900 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CHST8Q9H2A9 424 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TMEM8AQ9HCN3 771 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 AGPAT3Q9NRZ7 376 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 NLKQ9UBE8 527 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ZC3H7BQ9UGR2 993 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 CROTQ9UKG9 612 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 GUCA1BQ9UMX6 200 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 FAM32AQ9Y421 112 aaKnown RBP3.43□□□□□ -1.86
TOP2A-201ENST00000423485 MYO9BQ13459 2157 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SPTBP11277 2137 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 G3V2T6 193 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 TPP1O14773 563 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 SIN3BO75182 1162 aa3.43□□□□□ -1.86
TOP2A-201ENST00000423485 ATP5HO75947 161 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms