RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CYC1P08574 325 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 PKMP14618 531 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 SMSP52788 366 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 EFNA3P52797 238 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 NAP1L1P55209 391 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 SRSF11Q05519 484 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 FAM53BQ14153 422 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 GBX1Q14549 363 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 C3AR1Q16581 482 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 LONRF1Q17RB8 773 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 HKDC1Q2TB90 917 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 KRTCAP3Q53RY4 240 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 ZNF425Q6IV72 752 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 LRRC8BQ6P9F7 803 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 SPNS3Q6ZMD2 512 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 PPP1R21Q6ZMI0 780 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 MPP5Q8N3R9 675 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 CSNK1A1LQ8N752 337 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 SKA2Q8WVK7 121 aaPredicted RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 C14orf79Q96F83 325 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 MRPS30Q9NP92 439 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 CHRAC1Q9NRG0 131 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 SH3BGRL2Q9UJC5 107 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 MKL2Q9ULH7 1088 aa14.59□□□□□ -0.07
DDX56-202ENST00000415758 RUVBL2Q9Y230 463 aaKnown RBP14.59□□□□□ -0.07
DDX56-202ENST00000415758 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 MIF4GDA9UHW6 222 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 TXNDC9O14530 226 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 CLDN14O95500 239 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ANXA5P08758 320 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ESRRAP11474 423 aaPredicted RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 ATP5DP30049 168 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 KIR3DL1P43629 444 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ZNF33BQ06732 778 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 PRDX1Q06830 199 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 GTF3C1Q12789 2109 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ARHGAP19Q14CB8 494 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 OASLQ15646 514 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 ANKRD20A4Q4UJ75 823 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ZNF766Q5HY98 468 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 PCID2Q5JVF3 399 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 PLAG1Q6DJT9 500 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 NEK10Q6ZWH5 1172 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ZC3H7AQ8IWR0 971 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 UBL4BQ8N7F7 174 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 OR9A1PQ8NGU1 263 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 SMPDL3AQ92484 453 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 MTFMTQ96DP5 389 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 ACAT2Q9BWD1 397 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 LACRTQ9GZZ8 138 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 DRC3Q9H069 523 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 TREX1Q9NSU2 369 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 UTP6Q9NYH9 597 aaKnown RBP14.58□□□□□ -0.08
DDX56-202ENST00000415758 ITGB1BP2Q9UKP3 347 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 AMFRQ9UKV5 643 aa14.58□□□□□ -0.08
DDX56-202ENST00000415758 A0A0A6YYC8 382 aaPredicted RBP14.57□□□□□ -0.08
DDX56-202ENST00000415758 A0A0U1RQJ8 604 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 ASPDHA6ND91 283 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 C19orf84I3L1E1 186 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 I3L1I5 382 aaPredicted RBP14.57□□□□□ -0.08
DDX56-202ENST00000415758 C8orf89P0DMQ9 161 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 EZRP15311 586 aaKnown RBP14.57□□□□□ -0.08
DDX56-202ENST00000415758 PMP22Q01453 160 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 CDSNQ15517 529 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 SYT16Q17RD7 645 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 SPPL2CQ8IUH8 684 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 AMER2Q8N7J2 671 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 ACBD4Q8NC06 268 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 MDS2Q8NDY4 140 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 PPHLN1Q8NEY8 458 aaKnown RBP14.57□□□□□ -0.08
DDX56-202ENST00000415758 ZNF354BQ96LW1 612 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 GPR137Q96N19 417 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 CYTH2Q99418 400 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 SPOCK3Q9BQ16 436 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 TINAGQ9UJW2 476 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 MEMO1Q9Y316 297 aa14.57□□□□□ -0.08
DDX56-202ENST00000415758 REXO2Q9Y3B8 237 aaKnown RBP14.57□□□□□ -0.08
DDX56-202ENST00000415758 MTORP42345 2549 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 E7EVH7 732 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 H0YIG0 161 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 MYO1CO00159 1063 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 TTI1O43156 1089 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 PSIP1O75475 530 aaKnown RBP14.56□□□□□ -0.08
DDX56-202ENST00000415758 NDUFS3O75489 264 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 MLYCDO95822 493 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 RPA3P35244 121 aaPredicted RBP14.56□□□□□ -0.08
DDX56-202ENST00000415758 HSD17B2P37059 387 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 KRTAP21-3Q3LHN1 58 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.56□□□□□ -0.08
DDX56-202ENST00000415758 CTSL3PQ5NE16 218 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 ACER2Q5QJU3 275 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 ICE2Q659A1 982 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 SUSD1Q6UWL2 747 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 CPEB2Q7Z5Q1 589 aaKnown RBP14.56□□□□□ -0.08
DDX56-202ENST00000415758 METTL21AQ8WXB1 218 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 RERGQ96A58 199 aaPredicted RBP14.56□□□□□ -0.08
DDX56-202ENST00000415758 SCMH1Q96GD3 660 aa14.56□□□□□ -0.08
DDX56-202ENST00000415758 FRMD8P1Q9BZ68 369 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms