RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 FAM221BA6H8Z2 402 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 NME6O75414 186 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 PGRP06401 933 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 BDKRB1P46663 353 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 TOR1AIP1Q5JTV8 583 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 PRR23CQ6ZRP0 262 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SLC29A4Q7RTT9 530 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ZFAND4Q86XD8 727 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 MCEMP1Q8IX19 187 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 OR8J3Q8NGG0 315 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ESAMQ96AP7 390 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SLC39A13Q96H72 371 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 EPYCQ99645 322 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 CNPPD1Q9BV87 410 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 PACSIN3Q9UKS6 424 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ITM2AO43736 263 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 TGFB1P01137 390 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ITGB1P05556 798 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 FGF3P11487 239 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 JUPP14923 745 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SNAPC1Q16533 368 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.555e-8■■□□□ 12.6
PTPRF-205ENST00000414879 HNRNPA1L2Q32P51 320 aaKnown RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 NDUFAF6Q330K2 333 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 HACD2Q6Y1H2 254 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 GPR151Q8TDV0 419 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 PYCR2Q96C36 320 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 L3HYPDHQ96EM0 354 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 SGIP1Q9BQI5 828 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 EBF4Q9BQW3 602 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 CHID1Q9BWS9 393 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 C6orf62Q9GZU0 229 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 CWH43Q9H720 699 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 STON1Q9Y6Q2 735 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 A0A1W2PQU0 124 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 MTX2O75431 263 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ADRB3P13945 408 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ETV3P41162 512 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 RPS15AP62244 130 aaKnown RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 FADDQ13158 208 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 KDELC1Q6UW63 502 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 DPPA4Q7L190 304 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 ADGRG6Q86SQ4 1221 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 FAM47BQ8NA70 645 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 VANGL1Q8TAA9 524 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 C9orf43Q8TAL5 461 aaPredicted RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 DGCR6LQ9BY27 220 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 HDHD2Q9H0R4 259 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 FARSBQ9NSD9 589 aaKnown RBP11.62□□□□□ -0.55
PTPRF-205ENST00000414879 OSER1Q9NX31 292 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 PIAS3Q9Y6X2 628 aa11.62□□□□□ -0.55
PTPRF-205ENST00000414879 TOP3BO95985 862 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ALDOAP04075 364 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 DRD2P14416 443 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 DNAJA1P31689 397 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 STK19P49842 368 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 LRP8Q14114 963 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ZSWIM7Q19AV6 140 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 KIAA0319Q5VV43 1072 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF366Q8N895 744 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 GRIP2Q9C0E4 1043 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 PRODH2Q9UF12 536 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 PPM1HQ9ULR3 514 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 PSAT1Q9Y617 370 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 SPIN1Q9Y657 262 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 TCRBV21S2A2A0A5A6 115 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 C2orf71A6NGG8 1288 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 AKAP8O43823 692 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 SERPINA1P01009 418 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 SLC35E2BP0CK96 405 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 C6P13671 934 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 CSTF2P33240 577 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ATG9BQ674R7 924 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ANO7Q6IWH7 933 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ZNF765Q7L2R6 523 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 NUP54Q7Z3B4 507 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 C3orf58Q8NDZ4 430 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ST13P5Q8NFI4 369 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 OR5P2Q8WZ92 322 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 DGCR14Q96DF8 476 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 C17orf62Q9BQA9 187 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 IL17CQ9P0M4 197 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 DKK3Q9UBP4 350 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 ENTPD2Q9Y5L3 495 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 TRIM3O75382 744 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 RFPL2O75678 378 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 PRAMEF12O95522 483 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 FADS2O95864 444 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 AK1P00568 194 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 AQP1P29972 269 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 HNRNPKP61978 463 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■□□□□ 10.6
PTPRF-205ENST00000414879 HMGCS1Q01581 520 aa11.61□□□□□ -0.55
PTPRF-205ENST00000414879 DCTN2Q13561 401 aaKnown RBP11.61□□□□□ -0.55
PTPRF-205ENST00000414879 VN1R2Q8NFZ6 395 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms