RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HIF1AQ16665 826 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 PRAMEF13Q5VWM6 474 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 CPNE9Q8IYJ1 553 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 CSNK1A1LQ8N752 337 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 CPT1CQ8TCG5 803 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 EEF1AKMT1Q8WVE0 214 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 ATL1Q8WXF7 558 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 MIEF2Q96C03 454 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 SNF8Q96H20 258 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 CABS1Q96KC9 395 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 TGIF2Q9GZN2 237 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 SLC6A20Q9NP91 592 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 PPANQ9NQ55 473 aaKnown RBP13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 CCDC177Q9NQR7 707 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 NSMCE4AQ9NXX6 385 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 MAP4K5Q9Y4K4 846 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 TEX264Q9Y6I9 313 aa13.86□□□□□ -0.19
NIF3L1-205ENST00000409588 SETXQ7Z333 2677 aaKnown RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 IGKV1-8A0A0C4DH67 115 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 PYCARD-AS1I3L0S3 204 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 SORBS2O94875 1100 aaKnown RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 CYC1P08574 325 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ANXA5P08758 320 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ENO2P09104 434 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ZGLP1P0C6A0 271 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 GABRB3P28472 473 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 IMPA1P29218 277 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 GRK3P35626 688 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 SLC26A3P40879 764 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ELK3P41970 407 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 MLLT10P55197 1068 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 AP2B1P63010 937 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 TSTA3Q13630 321 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 UBAP2LQ14157 1087 aaKnown RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 KCTD19Q17RG1 926 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 TUBB8Q3ZCM7 444 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 MSS51Q4VC12 460 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 STEAP4Q687X5 459 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 FAM45BPQ6NSW5 357 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 PAQR3Q6TCH7 311 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 COX15Q7KZN9 410 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 MAATS1Q7Z4T9 603 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 LAPTM4BQ86VI4 370 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 KLHL7Q8IXQ5 586 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ZADH2Q8N4Q0 377 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 FAM45AQ8TCE6 357 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 STT3BQ8TCJ2 826 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 CAPZA3Q96KX2 299 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 HAUS8Q9BT25 410 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ZNF552Q9H707 407 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 MKKSQ9NPJ1 570 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 C14orf105Q9NVL8 296 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 TSR3Q9UJK0 312 aaKnown RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 PDE10AQ9Y233 779 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 B3GNT3Q9Y2A9 372 aa13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 SNRNP200O75643 2136 aaKnown RBP13.85□□□□□ -0.19
NIF3L1-205ENST00000409588 ANKRD12Q6UB98 2062 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 MED13Q9UHV7 2174 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CLEC18AA5D8T8 446 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 H0YIG0 161 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 H7BY64 318 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 SOCS6O14544 535 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 SEC31AO94979 1220 aaKnown RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 ICAM2P13598 275 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 FBLP22087 321 aaKnown RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 FDXRP22570 491 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CXCR2P25025 360 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 AVPR1BP47901 424 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 TIAL1Q01085 375 aaKnown RBP eCLIP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 RBBP7Q16576 425 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 NADK2Q4G0N4 442 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 AGAP7PQ5VUJ5 663 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 ATG9BQ674R7 924 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 DUPD1Q68J44 220 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CAPN13Q6MZZ7 669 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 AGTRAPQ6RW13 159 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 KIRREL2Q6UWL6 708 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 LCTLQ6UWM7 567 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CLEC18BQ6UXF7 455 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CYS1Q717R9 158 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 ADCK2Q7Z695 626 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 SLC26A11Q86WA9 606 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CLEC18CQ8NCF0 446 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 PRAP1Q96NZ9 151 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 AGAP4Q96P64 663 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 LMF1Q96S06 567 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 CRB3Q9BUF7 120 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 LHPPQ9H008 270 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 DRC3Q9H069 523 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 STOX2Q9P2F5 926 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 NOVA2Q9UNW9 492 aaKnown RBP13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 PLAAQ9Y263 795 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 HS3ST3B1Q9Y662 390 aa13.84□□□□□ -0.19
NIF3L1-205ENST00000409588 FLNCQ14315 2725 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 A0A1W2PQ72 361 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 KRT87PA6NCN2 255 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 USP27XA6NNY8 438 aa13.83□□□□□ -0.2
NIF3L1-205ENST00000409588 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms