RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 GALNTL5Q7Z4T8 443 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LDB1Q86U70 411 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RHOT2Q8IXI1 618 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DNAAF3Q8N9W5 541 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MMABQ96EY8 250 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CABS1Q96KC9 395 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DNAJC7Q99615 494 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 VKORC1Q9BQB6 163 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TUBB6Q9BUF5 446 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MKL2Q9ULH7 1088 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PPT2Q9UMR5 302 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RPH3AQ9Y2J0 694 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MPDZO75970 2070 aa11.24□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TTI1O43156 1089 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 GOT2P00505 430 aaKnown RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 STATHP02808 62 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 UQCRHP07919 91 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RBP3P10745 1247 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 KLK2P20151 261 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FOXD4Q12950 439 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LRRC8BQ6P9F7 803 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PAQR7Q86WK9 346 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RCOR2Q8IZ40 523 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 HMGCLL1Q8TB92 370 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CA5BP1Q8WTZ4 195 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 HDAC10Q969S8 669 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR2A5Q96R48 311 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CYTH2Q99418 400 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZFYVE21Q9BQ24 234 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DPH7Q9BTV6 452 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ACAT2Q9BWD1 397 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 C14orf105Q9NVL8 296 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MARCH4Q9P2E8 410 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FEZ2Q9UHY8 353 aaPredicted RBP11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SLC39A10Q9ULF5 831 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FAM169AQ9Y6X4 670 aa11.23□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FAM221AA4D161 298 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 QSOX1O00391 747 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FANCGO15287 622 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PJA2O43164 708 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 AKR1B10O60218 316 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FKBP9O95302 570 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 C8orf89P0DMQ9 161 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ABOP16442 354 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EMP3P54852 163 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EIF3EP60228 445 aaKnown RBP11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PRPSAP1Q14558 356 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 BTBD16Q32M84 506 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PLAG1Q6DJT9 500 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF425Q6IV72 752 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CEP128Q6ZU80 1094 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CPEB2Q7Z5Q1 589 aaKnown RBP11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 GHDCQ8N2G8 530 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TAB3Q8N5C8 712 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CPSF7Q8N684 471 aaKnown RBP11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CSNK1A1LQ8N752 337 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CCDC138Q96M89 665 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FOXC2Q99958 501 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PLCD4Q9BRC7 762 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CARD6Q9BX69 1037 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MKKSQ9NPJ1 570 aaPredicted RBP11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
SPTLC1P3-201ENST00000403408 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 KDM1AO60341 852 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SP1P08047 785 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ICAM2P13598 275 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MSX1P28360 303 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EEF1DP29692 281 aaKnown RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 GRIA1P42261 906 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 GDF10P55107 478 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EMC4Q5J8M3 183 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 DARS2Q6PI48 645 aaKnown RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SUSD1Q6UWL2 747 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ANKRD37Q7Z713 158 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 PLD3Q8IV08 490 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CCDC71Q8IV32 467 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 CDKL3Q8IVW4 592 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR8K1Q8NGG5 319 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR52K1Q8NGK4 314 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 OR9A4Q8NGU2 314 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 LILRB4Q8NHJ6 448 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ASZ1Q8WWH4 475 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MVB12AQ96EY5 273 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF354BQ96LW1 612 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 SMR3AQ99954 134 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 ZNF358Q9NW07 568 aa11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 TTC7AQ9ULT0 858 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1P3-201ENST00000403408 MXRA5Q9NR99 2828 aa11.21□□□□□ -0.62
SPTLC1P3-201ENST00000403408 SOWAHDA6NJG2 315 aa11.2□□□□□ -0.62
SPTLC1P3-201ENST00000403408 GABRR3A8MPY1 467 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms