RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ALDH18A1P54886 795 aaKnown RBP16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PCBP4P57723 403 aaKnown RBP16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 VSX2P58304 361 aaPredicted RBP16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CDC16Q13042 620 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 SETDB1Q15047 1291 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TGIF1Q15583 401 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 NXPE4Q6UWF7 544 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 RNF44Q7L0R7 432 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TIPARPQ7Z3E1 657 aaKnown RBP16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 TRABD2AQ86V40 505 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 LCA5Q86VQ0 697 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 GPR135Q8IZ08 494 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ABHD11Q8NFV4 315 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR4K1Q8NGD4 311 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CNTNAP3BQ96NU0 1288 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 OR2A5Q96R48 311 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 CNTNAP3Q9BZ76 1288 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 ACSL6Q9UKU0 697 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 RAXQ9Y2V3 346 aa16.46■□□□□ 0.23
PTCHD3P3-201ENST00000403073 FEZF1A0PJY2 475 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 H0YGG7 62 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZNF749O43361 778 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 LCMT2O60294 686 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SRPX2O60687 465 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SMIM24O75264 130 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 GLRA3O75311 464 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SIX3O95343 332 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EIF2S1P05198 315 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 VARSP26640 1264 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CCT5P48643 541 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ARF3P61204 181 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 RELAQ04206 551 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SLC18A2Q05940 514 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PDK4Q16654 411 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 WASHC2DQ5SRD0 308 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SLCO4C1Q6ZQN7 724 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SRRM1Q8IYB3 904 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZNF655Q8N720 491 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 KDF1Q8NAX2 398 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SLC38A9Q8NBW4 561 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 GALNT6Q8NCL4 622 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SNIP1Q8TAD8 396 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 UBTD2Q8WUN7 234 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SPNS1Q9H2V7 528 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 C12orf65Q9H3J6 166 aaKnown RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 OPTCQ9UBM4 332 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EMCNQ9ULC0 261 aa16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TMEM184BQ9Y519 407 aaPredicted RBP16.45■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TMEM8BA6NDV4 472 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 STMND1H3BQB6 276 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 K7EPI3 171 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 COPEO14579 308 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PRAMEF4O60810 478 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 DLGAP3O95886 979 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 STATHP02808 62 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 GNAZP19086 355 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EPORP19235 508 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CD82P27701 267 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CRHR1P34998 444 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PRAMEF9Q5VWM5 478 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 C6orf15Q6UXA7 325 aaPredicted RBP16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 LRIG3Q6UXM1 1119 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 LRRC70Q7Z2Q7 622 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TMPRSS11BQ86T26 416 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PROSER1Q86XN7 944 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 DTX1Q86Y01 620 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TEX9Q8N6V9 391 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZNF740Q8NDX6 193 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CLIP3Q96DZ5 547 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZNF285Q96NJ3 590 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 DCBLD2Q96PD2 775 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CAPS2Q9BXY5 557 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ACTR5Q9H9F9 607 aaPredicted RBP16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PELI2Q9HAT8 420 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 WDR70Q9NW82 654 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 GPRC5BQ9NZH0 403 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TMCO1Q9UM00 188 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PCDHB3Q9Y5E6 796 aa16.44■□□□□ 0.22
PTCHD3P3-201ENST00000403073 KIF26BQ2KJY2 2108 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CEP295Q9C0D2 2601 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CLGNO14967 610 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 RGS16O15492 202 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZSCAN9O15535 394 aaPredicted RBP16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 DLX3O60479 287 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 RAD1O60671 282 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SPAG7O75391 227 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 C1GALT1C1LP0DN25 315 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 LIPCP11150 499 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CREB1P16220 341 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EEF1DP29692 281 aaKnown RBP16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 GRK3P35626 688 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EIF2S3P41091 472 aaKnown RBP16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 BCL6P41182 706 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CASP8Q14790 479 aa16.43■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PCBP2Q15366 365 aaKnown RBP eCLIP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms