RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 TRIM38O00635 465 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 GSNP06396 782 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 SLC35G4P0C7Q5 338 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 CHRNB1P11230 501 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 IMPDH2P12268 514 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 LIPJQ5W064 366 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 DLEU7Q6UYE1 221 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 KBTBD6Q86V97 674 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 GALNT13Q8IUC8 556 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 OR5K2Q8NHB8 316 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 SERPINI1Q99574 410 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 DPY30Q9C005 99 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 OR51B5Q9H339 312 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 IKZF5Q9H5V7 419 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 PFDN4Q9NQP4 134 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 CHCHD3Q9NX63 227 aaKnown RBP14.44□□□□□ -0.1
MKS1-202ENST00000393119 KLHL20Q9Y2M5 609 aa14.44□□□□□ -0.1
MKS1-202ENST00000393119 DFNA5O60443 496 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 EEDO75530 441 aaKnown RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 HOXB3P14651 431 aaPredicted RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 SH3BGRP55822 239 aaPredicted RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 CYP4F2P78329 520 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 TDGQ13569 410 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 SMAD2Q15796 467 aaKnown RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 GRHL2Q6ISB3 625 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 PTCRAQ6ISU1 281 aaPredicted RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 NANOGP8Q6NSW7 305 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 PCYOX1LQ8NBM8 494 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 AURKBQ96GD4 344 aaPredicted RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 TMEM168Q9H0V1 697 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 TCEAL2Q9H3H9 227 aaPredicted RBP14.43□□□□□ -0.1
MKS1-202ENST00000393119 NANOGQ9H9S0 305 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 LMAN1LQ9HAT1 526 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 TBC1D29Q9UFV1 150 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 BTBD3Q9Y2F9 522 aa14.43□□□□□ -0.1
MKS1-202ENST00000393119 PRSS38A1L453 326 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 KRBA1A5PL33 1030 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 YY2O15391 372 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 ZSCAN9O15535 394 aaPredicted RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 MTHFD1P11586 935 aaKnown RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 RAE1P78406 368 aaKnown RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 PGS1Q32NB8 556 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 EOGTQ5NDL2 527 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 NOXRED1Q6NXP6 359 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 FAM180BQ6P0A1 224 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 SPATA24Q86W54 205 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 PDSS2Q86YH6 399 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 C10orf111Q8N326 155 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 C1orf52Q8N6N3 182 aaKnown RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 FBXO15Q8NCQ5 510 aaPredicted RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 OR7A2PQ8NGA2 310 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 HLA-CQ95604 372 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 TMEM125Q96AQ2 219 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 RAD51AP1Q96B01 352 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 MACROD1Q9BQ69 325 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 INPP5KQ9BT40 448 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 PREBQ9HCU5 417 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 CCDC177Q9NQR7 707 aaPredicted RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 GPRC5BQ9NZH0 403 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 VAPAQ9P0L0 249 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 FZD4Q9ULV1 537 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 ERVK-11Q9UQG0 969 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 PCDHA9Q9Y5H5 950 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 A0A1W2PPV9 198 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 H7BY64 318 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 CACNB4O00305 520 aaPredicted RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 SRFP11831 508 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 ATP6V1B2P21281 511 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 TRIM25Q14258 630 aaKnown RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 AAGABQ6PD74 315 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 GCNT7Q6ZNI0 430 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 VN1R5Q7Z5H4 357 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 DCUN1D3Q8IWE4 304 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 SLC5A11Q8WWX8 675 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 TOE1Q96GM8 510 aaKnown RBP14.42□□□□□ -0.1
MKS1-202ENST00000393119 PRAP1Q96NZ9 151 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 NDE1Q9NXR1 346 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 VPS29Q9UBQ0 182 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 GMEB1Q9Y692 573 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 FRYLO94915 3013 aa14.42□□□□□ -0.1
MKS1-202ENST00000393119 PIPSLA2A3N6 862 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 BBIP1A8MTZ0 92 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 BCAS2O75934 225 aaPredicted RBP14.41□□□□□ -0.1
MKS1-202ENST00000393119 IGHV4-34P06331 123 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 C1GALT1C1LP0DN25 315 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 JAK1P23458 1154 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 CDKN2CP42773 168 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 AP2B1P63010 937 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 UBXN2BQ14CS0 331 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 PRAMEF14Q5SWL7 426 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 CACHD1Q5VU97 1274 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 PRAMEF13Q5VWM6 474 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 NXPE4Q6UWF7 544 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 UNC5DQ6UXZ4 953 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 DHDDSQ86SQ9 333 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 TRIM73Q86UV7 250 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 PHACTR4Q8IZ21 702 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 LILRA2Q8N149 483 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 WDR48Q8TAF3 677 aa14.41□□□□□ -0.1
MKS1-202ENST00000393119 PATE1Q8WXA2 126 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms