RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 CDC14AQ9UNH5 594 aa16.04■□□□□ 0.16
SMN2-201ENST00000380741 NSG1A0A0A6YYJ2 146 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 E7ENX8 843 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 EDN3P14138 238 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 DCTP40126 519 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 EMP2P54851 167 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 TAP2Q03519 686 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 EEF1A2Q05639 463 aaKnown RBP16.03■□□□□ 0.16
SMN2-201ENST00000380741 CUL1Q13616 776 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 DHX34Q14147 1143 aaKnown RBP16.03■□□□□ 0.16
SMN2-201ENST00000380741 TTLL9Q3SXZ7 439 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 NEK10Q6ZWH5 1172 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 DENND6AQ8IWF6 608 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 ARHGEF39Q8N4T4 335 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 BRIX1Q8TDN6 353 aaKnown RBP16.03■□□□□ 0.16
SMN2-201ENST00000380741 ZNF480Q8WV37 535 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 PSMF1Q92530 271 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 ZNF669Q96BR6 464 aaPredicted RBP16.03■□□□□ 0.16
SMN2-201ENST00000380741 MMABQ96EY8 250 aaPredicted RBP16.03■□□□□ 0.16
SMN2-201ENST00000380741 ABCF3Q9NUQ8 709 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 SAMD15Q9P1V8 674 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 MED16Q9Y2X0 877 aa16.03■□□□□ 0.16
SMN2-201ENST00000380741 CREBBPQ92793 2442 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 FAM237BA0A1B0GVD1 139 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 A0A1W2PQ72 361 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 CTAGE9A4FU28 777 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 ZNF839A8K0R7 811 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 P2RX6O15547 441 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 PRPF4O43172 522 aaKnown RBP eCLIP16.02■□□□□ 0.16
SMN2-201ENST00000380741 CCNDBP1O95273 360 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 KRT14P02533 472 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 PRR35P0CG20 571 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 EZRP15311 586 aaKnown RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 CXCR2P25025 360 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 SOX11P35716 441 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 HSD17B2P37059 387 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 SLC26A3P40879 764 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 ARG2P78540 354 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 CTBP1Q13363 440 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 GARNL3Q5VVW2 1013 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 FAAH2Q6GMR7 532 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 TTC27Q6P3X3 843 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 ZNF549Q6P9A3 640 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 FAM180AQ6UWF9 173 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 ADCK2Q7Z695 626 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 RERGQ96A58 199 aaPredicted RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 SLX1AQ9BQ83 275 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 MKKSQ9NPJ1 570 aaPredicted RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 FBXO6Q9NRD1 293 aaPredicted RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 C14orf105Q9NVL8 296 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 UTP6Q9NYH9 597 aaKnown RBP16.02■□□□□ 0.16
SMN2-201ENST00000380741 PTGFRNQ9P2B2 879 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 PCYOX1Q9UHG3 505 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 OSGIN2Q9Y236 505 aa16.02■□□□□ 0.16
SMN2-201ENST00000380741 LRBAP50851 2863 aa16.02■□□□□ 0.15
SMN2-201ENST00000380741 IGHV1-45A0A0A0MS14 117 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 A0A0A6YYC8 382 aaPredicted RBP16.01■□□□□ 0.15
SMN2-201ENST00000380741 ZCWPW2A0A1B0GU75 182 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 GOLGA8MH3BSY2 632 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 I3L1I5 382 aaPredicted RBP16.01■□□□□ 0.15
SMN2-201ENST00000380741 SMAPO00193 183 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 HAT1O14929 419 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 LRRTM2O43300 516 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 FOXS1O43638 330 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
SMN2-201ENST00000380741 SERPINA7P05543 415 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 HEXBP07686 556 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 CELA2AP08217 269 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 ANXA5P08758 320 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 MLNP12872 115 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 THOC5Q13769 683 aaKnown RBP16.01■□□□□ 0.15
SMN2-201ENST00000380741 SYT16Q17RD7 645 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 PLD3Q8IV08 490 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 LRRC56Q8IYG6 542 aaPredicted RBP16.01■□□□□ 0.15
SMN2-201ENST00000380741 SIRT6Q8N6T7 355 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 OR1N1Q8NGS0 311 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 ASB11Q8WXH4 323 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 KCNJ9Q92806 393 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 TGIF2Q9GZN2 237 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 DRC3Q9H069 523 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 PLA2G3Q9NZ20 509 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 KLHL42Q9P2K6 505 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 CSMD1Q96PZ7 3565 aa16.01■□□□□ 0.15
SMN2-201ENST00000380741 SDR42E2A6NKP2 422 aa16■□□□□ 0.15
SMN2-201ENST00000380741 GFYI3L273 518 aa16■□□□□ 0.15
SMN2-201ENST00000380741 KIF5CO60282 957 aa16■□□□□ 0.15
SMN2-201ENST00000380741 MPC1LP0DKB6 136 aa16■□□□□ 0.15
SMN2-201ENST00000380741 FDXRP22570 491 aa16■□□□□ 0.15
SMN2-201ENST00000380741 SLC1A2P43004 574 aa16■□□□□ 0.15
SMN2-201ENST00000380741 EFNA3P52797 238 aa16■□□□□ 0.15
SMN2-201ENST00000380741 SNRPNP63162 240 aaKnown RBP16■□□□□ 0.15
SMN2-201ENST00000380741 ABATP80404 500 aa16■□□□□ 0.15
SMN2-201ENST00000380741 RELAQ04206 551 aa16■□□□□ 0.15
SMN2-201ENST00000380741 RPUSD3Q6P087 351 aaKnown RBP16■□□□□ 0.15
SMN2-201ENST00000380741 ZC3H7AQ8IWR0 971 aaKnown RBP16■□□□□ 0.15
SMN2-201ENST00000380741 AMER2Q8N7J2 671 aa16■□□□□ 0.15
SMN2-201ENST00000380741 BCORP1Q8N888 145 aa16■□□□□ 0.15
SMN2-201ENST00000380741 MCUQ8NE86 351 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms