RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ABHD11Q8NFV4 315 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 KIAA1524Q8TCG1 905 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 LRTOMTQ8WZ04 291 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMEM159Q96B96 161 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 NUS1Q96E22 293 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 SNRNP25Q9BV90 132 aaKnown RBP5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 GSDMCQ9BYG8 508 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRIM7Q9C029 511 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 PHPT1Q9NRX4 125 aaPredicted RBP5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 DONSONQ9NYP3 566 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 AKAP7Q9P0M2 348 aaPredicted RBP5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 TAAR2Q9P1P5 351 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 COL12A1Q99715 3063 aa5.12□□□□□ -1.59
RNU4-4P-201ENST00000364588 LOC102723971A0A1B0GUV8 181 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 NPIPB15A6NHN6 443 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 LGALS16A8MUM7 142 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 STMND1H3BQB6 276 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 PRPSAP2O60256 369 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 HEXIM1O94992 359 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 HRGP04196 525 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 HOXC4P09017 264 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 FGF3P11487 239 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 LIFP15018 202 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CTPS1P17812 591 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TNFAIP3P21580 790 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 LHCGRP22888 699 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CD1CP29017 333 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 MIPP30301 263 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 HTR7P34969 479 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAXP61244 160 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 AP1S1P61966 158 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CDK3Q00526 305 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 SRSF4Q08170 494 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 IL10RBQ08334 325 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 NSUN2Q08J23 767 aaKnown RBP eCLIP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRAF2Q12933 501 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAMLD1Q13495 774 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 ZNF235Q14590 738 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 RFTN1Q14699 578 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 ERMARDQ5T6L9 678 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 RAET1GQ6H3X3 334 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 DARS2Q6PI48 645 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 RFLNAQ6ZTI6 216 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CYP4V2Q6ZWL3 525 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 MARK2Q7KZI7 788 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 HSD11B1LQ7Z5J1 315 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TSPAN33Q86UF1 283 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TRIM74Q86UV6 250 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 C17orf82Q86X59 251 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 NAGSQ8N159 534 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 PGBD5Q8N414 524 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 MAML1Q92585 1016 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 ART4Q93070 314 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 NMD3Q96D46 503 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 REPS1Q96D71 796 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 DAZAP1Q96EP5 407 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 DTD2Q96FN9 168 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 SMIM14Q96QK8 99 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 PSKH2Q96QS6 385 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 FUCA2Q9BTY2 467 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 DPCDQ9BVM2 203 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 FRMD8Q9BZ67 464 aaPredicted RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 SLC25A18Q9H1K4 315 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 PARVAQ9NVD7 372 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CHMP5Q9NZZ3 219 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CWC15Q9P013 229 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMEM9Q9P0T7 183 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 CD84Q9UIB8 345 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 SUFUQ9UMX1 484 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 G3BP2Q9UN86 482 aaKnown RBP5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 TMEM98Q9Y2Y6 226 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 BSNQ9UPA5 3926 aa5.11□□□□□ -1.59
RNU4-4P-201ENST00000364588 IGHV1OR21-1A0A087WYE8 117 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 EFCAB7A8K855 629 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 A8MU76 341 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 VSTM5A8MXK1 200 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 EIF3CLB5ME19 914 aaKnown RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 H7C1Q1 480 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 PSMD9O00233 223 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SOCS5O75159 536 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 RNF8O76064 485 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 IVLP07476 585 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 PRKAR1AP10644 381 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CYP2A6P11509 494 aaPredicted RBP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 SFTPCP11686 197 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 TCF4P15884 667 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 FERP16591 822 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 LMO1P25800 156 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CERS1P27544 350 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CD82P27701 267 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CSTF2P33240 577 aaKnown RBP eCLIP5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 UGT1A3P35503 534 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ACTR1BP42025 376 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 GPR1P46091 355 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 RENBPP51606 427 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 LIMK2P53671 638 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 ACTR1AP61163 376 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 CCNIQ14094 377 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 DPYSQ14117 519 aa5.1□□□□□ -1.59
RNU4-4P-201ENST00000364588 GBX1Q14549 363 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms