RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SLC22A3O75751 556 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 LMNAP02545 664 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PCNAP12004 261 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 XRCC1P18887 633 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CXCR2P25025 360 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 AVPR2P30518 371 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NME5P56597 212 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KIR2DS5Q14953 304 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 WDR45BQ5MNZ6 344 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CACHD1Q5VU97 1274 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CYP20A1Q6UW02 462 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 WDR5BQ86VZ2 330 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KYQ8NBH2 561 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HUS1BQ8NHY5 278 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MTERF1Q99551 399 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PITHD1Q9GZP4 211 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 POT1Q9NUX5 634 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 BBIP1A8MTZ0 92 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 AIM2O14862 343 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PRICKLE3O43900 615 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 G6PDP11413 515 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 TDGF1P13385 188 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NME1P15531 152 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ITGAXP20702 1163 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 MAPK1P28482 360 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CCR8P51685 355 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 SLC25A3Q00325 362 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PRDX1Q06830 199 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ICE2Q659A1 982 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 LAYNQ6UX15 382 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 AMIGO1Q86WK6 493 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 OR4K1Q8NGD4 311 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 LCN9Q8WX39 176 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 AIF1LQ9BQI0 150 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 LRRC61Q9BV99 259 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 MRPL1Q9BYD6 325 aaKnown RBP20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 DENND2DQ9H6A0 471 aaPredicted RBP20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 VPS29Q9UBQ0 182 aa20.2■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ABCA7Q8IZY2 2146 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ZDBF2Q9HCK1 2354 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CELA2BP08218 269 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 AMD1P17707 334 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PSMB5P28074 263 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PIK3CBP42338 1070 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 FNTBP49356 437 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NUDT2P50583 147 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NXPH1P58417 271 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 UFM1P61960 85 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PHEXP78562 749 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ABATP80404 500 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 DDX39BQ13838 428 aaKnown RBP20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PRRT3Q5FWE3 981 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 C6orf163Q5TEZ5 329 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 BLOC1S3Q6QNY0 202 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 TSSK4Q6SA08 328 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 C16orf89Q6UX73 402 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 TMIGD1Q6UXZ0 262 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NET1Q7Z628 596 aaPredicted RBP20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 TRIM48Q8IWZ4 208 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 RNF175Q8N4F7 328 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 OR2A1Q8NGT9 310 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 FCRL1Q96LA6 429 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 THTPAQ9BU02 230 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 SPNS1Q9H2V7 528 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NT5DC2Q9H857 520 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CAAP1Q9H8G2 361 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ADGRE2Q9UHX3 823 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PPT2Q9UMR5 302 aa20.19■□□□□ 0.82
MAP1LC3A-201ENST00000360668 TRBV23OR9-2A0A075B6M9 112 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 FAM234BA2RU67 622 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 MAGEB17A8MXT2 336 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ANKRD28O15084 1053 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 VILLO15195 856 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NRP2O60462 931 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CCNDBP1O95273 360 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 VIPP01282 170 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PRPS2P11908 318 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 JAK1P23458 1154 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 UBE2IP63279 158 aaKnown RBP20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 REEP5Q00765 189 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ELOCQ15369 112 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 MMEL1Q495T6 779 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 REP15Q6BDI9 236 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PGM2L1Q6PCE3 622 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 FAM9CQ8IZT9 166 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 PROKR1Q8TCW9 393 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 APIPQ96GX9 242 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 KCNH6Q9H252 994 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CUEDC1Q9NWM3 386 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NMRK1Q9NWW6 199 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CPNE7Q9UBL6 633 aa20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 ARHGEF17Q96PE2 2063 aaPredicted RBP20.18■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CACNA1IQ9P0X4 2223 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 A0A088AWK7 358 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 A8MUI8 341 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 NR5A2O00482 541 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 FBP2O00757 339 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 LAMTOR5O43504 91 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 CIB2O75838 187 aa20.17■□□□□ 0.82
MAP1LC3A-201ENST00000360668 BCKDHAP12694 445 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms