RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CEACAM20Q6UY09 585 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 RANBP3LQ86VV4 465 aaPredicted RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 NUDT13Q86X67 352 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 CENPSQ8N2Z9 138 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 NFKBIDQ8NI38 313 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 CFAP20Q9Y6A4 193 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 MEIS3P2A8K0S8 358 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 G3V2L1 256 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 RASGRP1O95267 797 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 SOX14O95416 240 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PSKH1P11801 424 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 FAUP35544 74 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 OR4D2P58180 307 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 ATP6AP1Q15904 470 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 UPP1Q16831 310 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 IDNKQ5T6J7 187 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 KLHL35Q6PF15 583 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 Q6ZVL8 140 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 TICAM1Q8IUC6 712 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 NPAS3Q8IXF0 933 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 NXPE1Q8N323 547 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 DCAF4L2Q8NA75 395 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 OR52B6Q8NGF0 335 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 CYB5D2Q8WUJ1 264 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 RBM18Q96H35 190 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 IFT27Q9BW83 186 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 SMOXQ9NWM0 555 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 ERVW-1Q9UQF0 538 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 Q9Y3F1 56 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PROZP22891 400 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 BDKRB1P46663 353 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 TAS2R50P59544 299 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 MYBPC3Q14896 1274 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PCBP2Q15366 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
VCP-201ENST00000358901 AQP11Q8NBQ7 271 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 GSDMCQ9BYG8 508 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 AIG1Q9NVV5 245 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PRAMEF33A0A0G2JMD5 474 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 DAPL1A0PJW8 107 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 CA12O43570 354 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PRAMEF10O60809 474 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 INHAP05111 366 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 JUNP05412 331 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 CPN2P22792 545 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 STXBP1P61764 594 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 SH3BP2P78314 561 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 MINDY1Q8N5J2 469 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 KCTD7Q96MP8 289 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 MOV10Q9HCE1 1003 aaKnown RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 TM9SF3Q9HD45 589 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 AURKAO14965 403 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 DENRO43583 198 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 GMFGO60234 142 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 POP7O75817 140 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 ACP5P13686 325 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ZNF24P17028 368 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 RFC2P35250 354 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 STT3AP46977 705 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 LSAMPQ13449 338 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 SPATS1Q496A3 300 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CYBRD1Q53TN4 286 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 BLOC1S3Q6QNY0 202 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 KRTCAP2Q8N6L1 136 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 COX18Q8N8Q8 333 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 KCT2Q8NC54 265 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CNIH3Q8TBE1 160 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 HDAC2Q92769 488 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 KCNK13Q9HB14 408 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 B4GALT6Q9UBX8 382 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 NENFQ9UMX5 172 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 RNF6Q9Y252 685 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 GM2AP17900 193 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 OR1E2P47887 323 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 PREPP48147 710 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 KHKP50053 298 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 FBXO43Q4G163 708 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 BRAT1Q6PJG6 821 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 MINDY2Q8NBR6 621 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 TNFAIP8L1Q8WVP5 186 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ZSCAN5AQ9BUG6 496 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ADAMTS10Q9H324 1103 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CDC14AQ9UNH5 594 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 ASB3Q9Y575 518 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 MYH13Q9UKX3 1938 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 MYO10Q9HD67 2058 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 GRID2O43424 1007 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 TLX2O43763 284 aaPredicted RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 ITGB1P05556 798 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CBSLP0DN79 551 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 HTR1EP28566 365 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 CBSP35520 551 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 BCAP31P51572 246 aa13.33□□□□□ -0.28
VCP-201ENST00000358901 RPS13P62277 151 aaKnown RBP13.33□□□□□ -0.28
VCP-201ENST00000358901 ILF3Q12906 894 aaKnown RBP eCLIP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms