RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 OR4M1Q8NGD0 313 aa18.33■□□□□ 0.52
PRPF39-201ENST00000355765 DNAJB3Q8WWF6 145 aa18.33■□□□□ 0.52
PRPF39-201ENST00000355765 DEDD2Q8WXF8 326 aa18.33■□□□□ 0.52
PRPF39-201ENST00000355765 MGLLQ99685 303 aa18.33■□□□□ 0.52
PRPF39-201ENST00000355765 ASPNQ9BXN1 380 aa18.33■□□□□ 0.52
PRPF39-201ENST00000355765 C11orf54Q9H0W9 315 aaPredicted RBP18.33■□□□□ 0.52
PRPF39-201ENST00000355765 CASTOR2A6NHX0 329 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 AQP1P29972 269 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 CSNK2BP67870 215 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 FAPQ12884 760 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZNF235Q14590 738 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZRANB3Q5FWF4 1079 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 TAPT1Q6NXT6 567 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 GLT6D1Q7Z4J2 308 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 CACTIN-AS1Q8N1I8 211 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 OR52J3Q8NH60 311 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 TBC1D20Q96BZ9 403 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 FEVQ99581 238 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 APOL5Q9BWW9 433 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 KCNH6Q9H252 994 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ATP13A2Q9NQ11 1180 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 UNCXA6NJT0 531 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 C9P02748 559 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 PKLRP30613 574 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZNF140P52738 457 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 BTBD16Q32M84 506 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 USP39Q53GS9 565 aaKnown RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 GLRX5Q86SX6 157 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 GLCCI1Q86VQ1 547 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 EXOC2Q96KP1 924 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 GON7Q9BXV9 100 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 POLR1EQ9GZS1 481 aaKnown RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 CSNK1G1Q9HCP0 422 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 OLA1Q9NTK5 396 aaKnown RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ELOVL2Q9NXB9 296 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 MS4A12Q9NXJ0 267 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZNF226Q9NYT6 803 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 NUDT4Q9NZJ9 180 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 KCNN3Q9UGI6 736 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 FKBPLQ9UIM3 349 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 SNX7Q9UNH6 387 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ITM2BQ9Y287 266 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 DNMT3AQ9Y6K1 912 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 RFXANKO14593 260 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 POLR1CO15160 346 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ULK1O75385 1050 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 CD72P21854 359 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 TACR1P25103 407 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 PTPN6P29350 595 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 KDELR2P33947 212 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 MXD1Q05195 221 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 SLC39A12Q504Y0 691 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 AFTPHQ6ULP2 937 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 CAMKK1Q8N5S9 505 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZNF557Q8N988 423 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 B3GNT7Q8NFL0 401 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 ZFAND1Q8TCF1 268 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 HASPINQ8TF76 798 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 TADA1Q96BN2 335 aa18.32■□□□□ 0.52
PRPF39-201ENST00000355765 NLE1Q9NVX2 485 aaPredicted RBP18.32■□□□□ 0.52
PRPF39-201ENST00000355765 B4DXG7 233 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ADM5C9JUS6 153 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 TMCC2O75069 709 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ESR1P03372 595 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 RPS5P46782 204 aaKnown RBP18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SSX1Q16384 188 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 OR4F3Q6IEY1 312 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ATCAYQ86WG3 371 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 RASAL3Q86YV0 1011 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 MDGA1Q8NFP4 955 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 EGFL8Q99944 293 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SRRQ9GZT4 340 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SLC22A4Q9H015 551 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ABCC13Q9NSE7 274 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 FKBP14Q9NWM8 211 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 KLK4Q9Y5K2 254 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 TNFRSF1BP20333 461 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SSTR4P31391 388 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 DGKEP52429 567 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 MAD2L1Q13257 205 aaPredicted RBP18.31■□□□□ 0.52
PRPF39-201ENST00000355765 PCBP2Q15366 365 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRPF39-201ENST00000355765 LRIF1Q5T3J3 769 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 FAAH2Q6GMR7 532 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 NADSYN1Q6IA69 706 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 SLC44A2Q8IWA5 706 aaPredicted RBP18.31■□□□□ 0.52
PRPF39-201ENST00000355765 GPC2Q8N158 579 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 TEX26Q8N6G2 289 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 IGSF8Q969P0 613 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 TRMT61AQ96FX7 289 aaKnown RBP18.31■□□□□ 0.52
PRPF39-201ENST00000355765 CCM2Q9BSQ5 444 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 ZYG11BQ9C0D3 744 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 PLCXD1Q9NUJ7 323 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 RBPJLQ9UBG7 517 aa18.31■□□□□ 0.52
PRPF39-201ENST00000355765 TMPRSS11EQ9UL52 423 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms