RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PCBP2Q15366 365 aaKnown RBP eCLIP5.64□□□□□ -1.512e-7■■■■□ 24.3
SRGAP1-201ENST00000355086 GRIK5Q16478 980 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 VARS2Q5ST30 1063 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TMCO2Q7Z6W1 182 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 IFNL1Q8IU54 200 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 OR4M2Q8NGB6 313 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 JOSD2Q8TAC2 188 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 LMX1AQ8TE12 382 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PCDHA2Q9Y5H9 948 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 USP31Q70CQ4 1352 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MEIS2O14770 477 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 OR4F21O95013 312 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 DECR1Q16698 335 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 XKRXQ6PP77 449 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NATD1Q8N6N6 113 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MFSD8Q8NHS3 518 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 CPXM1Q96SM3 734 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TRIM36Q9NQ86 728 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TNFRSF10DQ9UBN6 386 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF99A8MXY4 864 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ACTR1BP42025 376 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF431Q8TF32 576 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 GRHPRQ9UBQ7 328 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 WASF2Q9Y6W5 498 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ICE1Q9Y2F5 2266 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 J3QRK9 145 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PRPS1L1P21108 318 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 BMP8BP34820 402 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 IDH3AP50213 366 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SLBPQ14493 270 aaKnown RBP eCLIP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 CEACAM20Q6UY09 585 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 BMP8AQ7Z5Y6 402 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NPAS4Q8IUM7 802 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PLD5Q8N7P1 536 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC13A3Q8WWT9 602 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 C12orf43Q96C57 262 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TMEM165Q9HC07 324 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PCDHB14Q9Y5E9 798 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 BLOC1S5-TXNDC5H3BN57 136 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MAP2K7O14733 419 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NPHS1O60500 1241 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TAF1AQ15573 450 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 LGI4Q8N135 537 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 BPIFB1Q8TDL5 484 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 KCNMB3Q9NPA1 279 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PPP1R14DQ9NXH3 145 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PADI3Q9ULW8 664 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 M0R2N6 131 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ABLIM1O14639 778 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PLD2O14939 933 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MAB21L1Q13394 359 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 VTCN1Q7Z7D3 282 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 CLNKQ7Z7G1 428 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC37A3Q8NCC5 494 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 HSPA12BQ96MM6 686 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PKP4Q99569 1192 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 Q9N2J8 555 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SCP2D1Q9UJQ7 156 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PADI2Q9Y2J8 665 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 HEXBP07686 556 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MMP8P22894 467 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TPTEP56180 551 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF550Q7Z398 422 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NLGN2Q8NFZ4 835 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC7A11Q9UPY5 501 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TET3O43151 1660 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 H7C417 338 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NPTX1Q15818 432 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF517Q6ZMY9 492 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 OSTF1Q92882 214 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ABCC3O15438 1527 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 RBM47A0AV96 593 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 CSNK2A2P19784 350 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 GNMTQ14749 295 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TRMT10AQ8TBZ6 339 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 DQX1Q8TE96 717 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 S100A16Q96FQ6 103 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 HTR1AP08908 422 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 GSTT2P0CG29 244 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 MAGEA11P43364 429 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 ZNF781Q8N8C0 355 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 DNAJB8Q8NHS0 232 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 AP1M2Q9Y6Q5 423 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 C1orf167Q5SNV9 1468 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 TMEM88BA6NKF7 163 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 SLC16A8O95907 504 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 DSTNP60981 165 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 IL10RBQ08334 325 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 KLF1Q13351 362 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 RFTN1Q14699 578 aaPredicted RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 CHADLQ6NUI6 762 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PSMG2Q969U7 264 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 S100PBPQ96BU1 408 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 NEDD4LQ96PU5 975 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 DHX33Q9H6R0 707 aaKnown RBP5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 GKN2Q86XP6 184 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 AVL9Q8NBF6 648 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 KCNJ9Q92806 393 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 IL4I1Q96RQ9 567 aa5.64□□□□□ -1.51
SRGAP1-201ENST00000355086 PTGES2Q9H7Z7 377 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms