RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 KLHL5Q96PQ7 755 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PKMYT1Q99640 499 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 GPR21Q99679 349 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 THUMPD3Q9BV44 507 aaKnown RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ITPAQ9BY32 194 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 RIBC2Q9H4K1 309 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SP110Q9HB58 689 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 CCDC177Q9NQR7 707 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 C1orf109Q9NX04 203 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SLC25A37Q9NYZ2 338 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 CD274Q9NZQ7 290 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 EVLQ9UI08 416 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 POLR3HQ9Y535 204 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 GMPPBQ9Y5P6 360 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ARL5AQ9Y689 179 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ITPR1Q14643 2758 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PLXNB2O15031 1838 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PATJQ8NI35 1801 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 OTOGLQ3ZCN5 2332 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SLC28A1O00337 649 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 WNT9AO14904 365 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 MUSKO15146 869 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 RAD51BO15315 384 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TBX1O43435 398 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SCO2O43819 266 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 VPS26AO75436 327 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PARNO95453 639 aaKnown RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 KRT75O95678 551 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 FADS2O95864 444 aaKnown RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SERPINA1P01009 418 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 IL6P05231 212 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 C1QTNF9P0C862 333 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SMIM10L2AP0DMW4 78 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SMIM10L2BP0DMW5 78 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 HAPLN1P10915 354 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 FPR1P21462 350 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PBX3P40426 434 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ADCYAP1R1P41586 468 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 CLK1P49759 484 aaKnown RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ZNF140P52738 457 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PTPRCAPQ14761 206 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TEAD4Q15561 434 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 MAPKAPK3Q16644 382 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 FBXO48Q5FWF7 155 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 LRIF1Q5T3J3 769 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PIK3R6Q5UE93 754 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 AGAP6Q5VW22 663 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 MLIPQ5VWP3 458 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 IL27RAQ6UWB1 636 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 GDPD3Q7L5L3 318 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SNX20Q7Z614 316 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SCD5Q86SK9 330 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ZDHHC21Q8IVQ6 265 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 CLIP4Q8N3C7 705 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 METTL4Q8N3J2 472 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 AMER2Q8N7J2 671 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TMEM105Q8N8V8 129 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 Q8N9G6 341 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 ZNF540Q8NDQ6 660 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 FAM83FQ8NEG4 500 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 KBTBD8Q8NFY9 601 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PYCR2Q96C36 320 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 CEP295NLQ96MC4 621 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 AGAP4Q96P64 663 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 GAD1Q99259 594 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 NDEL1Q9GZM8 345 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 NACA2Q9H009 215 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 IKZF5Q9H5V7 419 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PLCXD1Q9NUJ7 323 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 IL37Q9NZH6 218 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 INVSQ9Y283 1065 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 MAN2B2Q9Y2E5 1009 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 PCDHGA3Q9Y5H0 932 aa7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TNPO3Q9Y5L0 923 aaKnown RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 TIMM13Q9Y5L4 95 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-202ENST00000354421 SPTA1P02549 2419 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 IGLV3-10A0A075B6K4 115 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 A0A096LPI6 279 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-202ENST00000354421 UBA6A0AVT1 1052 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-202ENST00000354421 TMEM8BA6NDV4 472 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 TBKBP1A7MCY6 615 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 EVPLLA8MZ36 301 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 LOC110117498-PIK3R3F6TDL0 507 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 OR7A17O14581 309 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-202ENST00000354421 HYAL3O43820 417 aaPredicted RBP7.29□□□□□ -1.24
C11orf54-202ENST00000354421 IDH3BO43837 385 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 AIREO43918 545 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 DPM1O60762 260 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 ERN1O75460 977 aaKnown RBP7.29□□□□□ -1.24
C11orf54-202ENST00000354421 NDUFS3O75489 264 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 WDR47O94967 919 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 SEMG1P04279 462 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 KRT8P05787 483 aa7.29□□□□□ -1.24
C11orf54-202ENST00000354421 LCKP06239 509 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms