RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 BPIP17213 487 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 JUNBP17275 347 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 DGUOKQ16854 277 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 SYT16Q17RD7 645 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PLD4Q96BZ4 506 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 DACH2Q96NX9 599 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 COPS8Q99627 209 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 APOL4Q9BPW4 351 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 CLMPQ9H6B4 373 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 GPN2Q9H9Y4 310 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 KRT84Q9NSB2 600 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 MARCH5Q9NX47 278 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PCDH10Q9P2E7 1040 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 GREB1Q4ZG55 1949 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 HTR1AP08908 422 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 CCDC159P0C7I6 412 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 TGM1P22735 817 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 MRPL58Q14197 206 aaKnown RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 SF1Q15637 639 aaKnown RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 RFX4Q33E94 735 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 P2RY8Q86VZ1 359 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PIK3C3Q8NEB9 887 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 NDNFQ8TB73 568 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 UBE2FQ969M7 185 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PDLIM5Q96HC4 596 aaKnown RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 MTERF1Q99551 399 aaKnown RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 RHNO1Q9BSD3 238 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 MAT2BQ9NZL9 334 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 LHX3Q9UBR4 397 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 SLCO3A1Q9UIG8 710 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 ABCG2Q9UNQ0 655 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 SAMD4AQ9UPU9 718 aaKnown RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 CLIC1O00299 241 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 FPGTO14772 594 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 TBX1O43435 398 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 CKMP06732 381 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 ZDHHC11BP0C7U3 371 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 NCS1P62166 190 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 PTCHD3Q3KNS1 767 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 OR2T5Q6IEZ7 315 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 OR2T29Q8NH02 315 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 APIPQ96GX9 242 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 PRRG3Q9BZD7 231 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 REEP1Q9H902 201 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 SCN10AQ9Y5Y9 1956 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 A0A1W2PQ72 361 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 EPN2O95208 641 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 CD160O95971 181 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 ALOX5P09917 674 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 SPAM1P38567 509 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 DPY19L1Q2PZI1 675 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 GTF2IRD2BQ6EKJ0 949 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 GTF2IRD2Q86UP8 949 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 WFDC5Q8TCV5 224 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 CCDC115Q96NT0 180 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 PSD2Q9BQI7 771 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 SLC32A1Q9H598 525 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 PAK1IP1Q9NWT1 392 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 USE1Q9NZ43 259 aa16.03■□□□□ 0.16
CDC42EP4-201ENST00000335793 H7C0S8 307 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ALX3O95076 343 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 PRSS23O95084 383 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 SEC24AO95486 1093 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ENGP17813 658 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ACRV1P26436 265 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 GP2P55259 537 aaKnown RBP16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 IRF8Q02556 426 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 KIAA0040Q15053 153 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 CARD16Q5EG05 197 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ZNF691Q5VV52 312 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ATG9BQ674R7 924 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 TXNDC8Q6A555 127 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 CEP68Q76N32 757 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 CYP4Z1Q86W10 505 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 REXO4Q9GZR2 422 aaKnown RBP16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 KCNH6Q9H252 994 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 PAQR5Q9NXK6 330 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ENPP5Q9UJA9 477 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 UGT2B11O75310 529 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 ITIH1P19827 911 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 TRIM71Q2Q1W2 868 aaKnown RBP16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 USP39Q53GS9 565 aaKnown RBP16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 GPR153Q6NV75 609 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 CHST9Q7L1S5 443 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 MED8Q96G25 268 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 SLC22A12Q96S37 553 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 VNN3Q9NY84 501 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 SH3BP4Q9P0V3 963 aa16.02■□□□□ 0.16
CDC42EP4-201ENST00000335793 TRBC1P01850 177 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 C1QCP02747 245 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 MT-ND2P03891 347 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 MRPL19P49406 292 aaKnown RBP16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 ZXDBP98169 803 aa16.02■□□□□ 0.15
CDC42EP4-201ENST00000335793 ABHD18Q0P651 414 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms