RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 SPCS2Q15005 226 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ACOX1Q15067 660 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GTF2IRD2BQ6EKJ0 949 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DUS1LQ6P1R4 473 aaKnown RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GTF2IRD2Q86UP8 949 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 S100ZQ8WXG8 99 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SMG9Q9H0W8 520 aaKnown RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 THUMPD1Q9NXG2 353 aaKnown RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SELENONQ9NZV5 590 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HSPE1-MOB4S4R3N1 261 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 LAG3P18627 525 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ALDH4A1P30038 563 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PBLDP30039 288 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HLA-FP30511 346 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HNF4AP41235 474 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KCNC3Q14003 757 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ANXA8L1Q5VT79 327 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KIAA1614Q5VZ46 1190 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DCDC5Q6ZRR9 648 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GAREM2Q75VX8 874 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ANKRD13BQ86YJ7 626 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RAVER1Q8IY67 606 aaKnown RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CLECL1Q8IZS7 167 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SLC39A11Q8N1S5 342 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TIFAQ96CG3 184 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 IL21Q9HBE4 155 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GPBP1L1Q9HC44 474 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FZD4Q9ULV1 537 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CRATP43155 626 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PRIM2P49643 509 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KEAP1Q14145 624 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 Q6ZVL8 140 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CEP68Q76N32 757 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 EIF3MQ7L2H7 374 aaKnown RBP11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SYTL1Q8IYJ3 562 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CEP44Q9C0F1 390 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ASAH2Q9NR71 780 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HS3ST2Q9Y278 367 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PIKFYVEQ9Y2I7 2098 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GBF1Q92538 1859 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GREM1O60565 184 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 OLFM2O95897 454 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF30P17039 623 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CDH3P22223 829 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MAP2K4P45985 399 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 RXRGP48443 463 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DAPP51397 102 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CCR3P51677 355 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 DOC2AQ14183 400 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PERM1Q5SV97 790 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 BRAT1Q6PJG6 821 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AGTRAPQ6RW13 159 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AHSA2Q719I0 299 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TSPYL5Q86VY4 417 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 C1orf52Q8N6N3 182 aaKnown RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 C11orf65Q8NCR3 313 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HERC2P3Q9BVR0 1158 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CPEB1Q9BZB8 566 aaKnown RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 AASSQ9UDR5 926 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VPS4AQ9UN37 437 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 NUP214P35658 2090 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 UGDHO60701 494 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF821O75541 412 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 KCNK5O95279 499 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HTR1AP08908 422 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 C1SP09871 688 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 LAMP1P11279 417 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PRPH2P23942 346 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 OPRL1P41146 370 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MAGEA2P43356 314 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SLC7A9P82251 487 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VLDLRP98155 873 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SLC14A1Q13336 389 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 UGT8Q16880 541 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PIWIL3Q7Z3Z3 882 aaKnown RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 TMCO2Q7Z6W1 182 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MCCC1Q96RQ3 725 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MYOCQ99972 504 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SPASTQ9UBP0 616 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ERGIC3Q9Y282 383 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 E7EQ34 232 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 GFYI3L273 518 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 SH3BP5O60239 455 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 C9P02748 559 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PABPC1P11940 636 aaKnown RBP11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 MVKQ03426 396 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 ZNF33BQ06732 778 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 HKDC1Q2TB90 917 aa11.32□□□□□ -0.6
CSPG4P4Y-201ENST00000333235 PAGE2BQ5JRK9 111 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms