RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 MARVELD2Q8N4S9 558 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 OR7A2PQ8NGA2 310 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 RPF2Q9H7B2 306 aaKnown RBP13.13□□□□□ -0.31
VMP1-201ENST00000262291 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 KCNH1O95259 989 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 MRPL19P49406 292 aaKnown RBP13.13□□□□□ -0.31
VMP1-201ENST00000262291 PWP1Q13610 501 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 FGL2Q14314 439 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 TMEM52BQ4KMG9 183 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 ZNF658BQ4V348 819 aaPredicted RBP13.13□□□□□ -0.31
VMP1-201ENST00000262291 CDKL4Q5MAI5 379 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 IER5LQ5T953 404 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 FAM124AQ86V42 546 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 RASGRP3Q8IV61 690 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 OR10Q1Q8NGQ4 319 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 TSPEARQ8WU66 669 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 MKRN2Q9H000 416 aaKnown RBP13.13□□□□□ -0.31
VMP1-201ENST00000262291 SPNS1Q9H2V7 528 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 CLMPQ9H6B4 373 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 MOSPD1Q9UJG1 213 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 ASF1AQ9Y294 204 aa13.13□□□□□ -0.31
VMP1-201ENST00000262291 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
VMP1-201ENST00000262291 TNFAIP8O95379 198 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 AMD1P17707 334 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 COL9A2Q14055 689 aaPredicted RBP13.12□□□□□ -0.31
VMP1-201ENST00000262291 TMEM31Q5JXX7 168 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 OR4F3Q6IEY1 312 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 NOXRED1Q6NXP6 359 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 PNCKQ6P2M8 343 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 GCNT7Q6ZNI0 430 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 LPCAT2Q7L5N7 544 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ADGRG5Q8IZF4 528 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ZNF740Q8NDX6 193 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 FIG4Q92562 907 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 CAAP1Q9H8G2 361 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 OBP2AQ9NY56 170 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ACTR3BQ9P1U1 418 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 RSL24D1Q9UHA3 163 aaKnown RBP13.12□□□□□ -0.31
VMP1-201ENST00000262291 PLEKHM1Q9Y4G2 1056 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 C7orf72A4D263 438 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 K7EQS6 105 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 QSOX1O00391 747 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 FOXM1Q08050 763 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 MAD2L1Q13257 205 aaPredicted RBP13.12□□□□□ -0.31
VMP1-201ENST00000262291 GLYATQ6IB77 296 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 CES5AQ6NT32 575 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 DTWD1Q8N5C7 304 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 BTBD9Q96Q07 612 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ZCCHC2Q9C0B9 1178 aaKnown RBP13.12□□□□□ -0.31
VMP1-201ENST00000262291 CD93Q9NPY3 652 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 S100A3P33764 101 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 CDK3Q00526 305 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 BCL7AQ4VC05 210 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 METTL2BQ6P1Q9 378 aaKnown RBP13.12□□□□□ -0.31
VMP1-201ENST00000262291 SLC7A5P1Q8MH63 180 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 CLEC4FQ8N1N0 589 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 DPP10Q8N608 796 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 FAM86B1Q8N7N1 296 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 HUS1BQ8NHY5 278 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 BIRC7Q96CA5 298 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 HDAC8Q9BY41 377 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 ZDHHC5Q9C0B5 715 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 LMAN2LQ9H0V9 348 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 OSGEPL1Q9H4B0 414 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 PCDHB14Q9Y5E9 798 aa13.12□□□□□ -0.31
VMP1-201ENST00000262291 KIAA1549LQ6ZVL6 1849 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 SOCS2O14508 198 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 MYCLP1P12525 358 aaPredicted RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 TMED10P49755 219 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 BNIP2Q12982 314 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 LCN8Q6JVE9 175 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 CHST15Q7LFX5 561 aaPredicted RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 TICAM1Q8IUC6 712 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 SYT12Q8IV01 421 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 C1orf52Q8N6N3 182 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 TRIML2Q8N7C3 387 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 OR56A3Q8NH54 315 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 OR14C36Q8NHC7 312 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 WDR20Q8TBZ3 569 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 CMTM7Q96FZ5 175 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 TRNAU1APQ9NX07 287 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 ZFR2Q9UPR6 939 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 FUOMA2VDF0 154 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 ARNTLO00327 626 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 FUCA1P04066 466 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 FAM58BPP0C7Q3 252 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 ZNF26P17031 533 aaPredicted RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 PSMA4P25789 261 aaKnown RBP13.11□□□□□ -0.31
VMP1-201ENST00000262291 DPTQ07507 201 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 CYP4F3Q08477 520 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 SLBPQ14493 270 aaKnown RBP eCLIP13.11□□□□□ -0.31
VMP1-201ENST00000262291 IRF4Q15306 451 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 PYCR3Q53H96 274 aa13.11□□□□□ -0.31
VMP1-201ENST00000262291 FAM46CQ5VWP2 391 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms