RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 H0YGG7 62 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 PHGDHO43175 533 aaKnown RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 ACSL3O95573 720 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 ALBP02768 609 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 CTSBP07858 339 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 PIM1P11309 404 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 SFTPCP11686 197 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 CNTFP26441 200 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 TNFRSF8P28908 595 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 GGT5P36269 586 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 SERPINB9P50453 376 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 ARF3P61204 181 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 EFTUD2Q15029 972 aaKnown RBP eCLIP16.64■□□□□ 0.254e-6■■□□□ 11.5
MRPL28-201ENST00000199706 TSNQ15631 228 aaKnown RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 MUM1Q2TAK8 710 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 NKAIN1Q4KMZ8 207 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 WASHC2DQ5SRD0 308 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 FRMPD2BQ6IN97 320 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 FAM199XQ6PEV8 388 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 FRA10AC1Q70Z53 315 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 TAOK1Q7L7X3 1001 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 OR4K1Q8NGD4 311 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 THAP4Q8WY91 577 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 RERGQ96A58 199 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 NACC2Q96BF6 587 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 ATG10Q9H0Y0 220 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 ADNPQ9H2P0 1102 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 CUEDC1Q9NWM3 386 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-201ENST00000199706 FETUBQ9UGM5 382 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 TCFL5Q9UL49 500 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 NFU1Q9UMS0 254 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 POLHQ9Y253 713 aa16.64■□□□□ 0.25
MRPL28-201ENST00000199706 A0A087WUV0 522 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 A0A087X1B8 175 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 LOC105369274A0A096LPK9 316 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 LOC102723532A0A0G2JNH3 316 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 HYKKA2RU49 373 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 HMX2A2RU54 273 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 NKX2-8O15522 239 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 NRP2O60462 931 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 FAM155BO75949 473 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 GRK3P35626 688 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 SLC6A12P48065 614 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 SERPINB8P50452 374 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 VSX2P58304 361 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 CSNK1G2P78368 415 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 TGFBIQ15582 683 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 TBR1Q16650 682 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 PTCHD3Q3KNS1 767 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 SOWAHCQ53LP3 525 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 MRPL14Q6P1L8 145 aaKnown RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 TBC1D1Q86TI0 1168 aaPredicted RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 OR4N4Q8N0Y3 316 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 ARHGEF39Q8N4T4 335 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 CSNK1A1LQ8N752 337 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 ENDOVQ8N8Q3 282 aaKnown RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 PDPRQ8NCN5 879 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 ADAMTS17Q8TE56 1095 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 RHBDF1Q96CC6 855 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 OR4K3Q96R72 315 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 TXLNGYQ9BZA5 131 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 NMRAL1Q9HBL8 299 aa16.63■□□□□ 0.25
MRPL28-201ENST00000199706 DHCR7Q9UBM7 475 aaKnown RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 MRPS18BQ9Y676 258 aaKnown RBP16.63■□□□□ 0.25
MRPL28-201ENST00000199706 H7BY64 318 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 HAT1O14929 419 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 KATNA1O75449 491 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 KLF7O75840 302 aaPredicted RBP16.62■□□□□ 0.25
MRPL28-201ENST00000199706 GUCA1CO95843 209 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 INHBAP08476 426 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 LTA4HP09960 611 aaKnown RBP16.62■□□□□ 0.25
MRPL28-201ENST00000199706 ITGAXP20702 1163 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 MAGEA12P43365 314 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 CCR8P51685 355 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 FAM53BQ14153 422 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 LCN10Q6JVE6 187 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 TTLL10Q6ZVT0 673 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 ADCK2Q7Z695 626 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 GPSM1Q86YR5 675 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 OR2Y1Q8NGV0 311 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 RHEBL1Q8TAI7 183 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 STAG3L4Q8TBR4 150 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 C10orf90Q96M02 699 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 PRAP1Q96NZ9 151 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 IP6K3Q96PC2 410 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 CNOT10Q9H9A5 744 aaKnown RBP16.62■□□□□ 0.25
MRPL28-201ENST00000199706 PELI2Q9HAT8 420 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 NXT1Q9UKK6 140 aaKnown RBP16.62■□□□□ 0.25
MRPL28-201ENST00000199706 CDC14AQ9UNH5 594 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 ACOT9Q9Y305 439 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 KCNE2Q9Y6J6 123 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 IKBKGQ9Y6K9 419 aa16.62■□□□□ 0.25
MRPL28-201ENST00000199706 PRPF4O43172 522 aaKnown RBP eCLIP16.61■□□□□ 0.257e-9■■■■■ 28.8
MRPL28-201ENST00000199706 KERAO60938 352 aa16.61■□□□□ 0.25
MRPL28-201ENST00000199706 KRT38O76015 456 aa16.61■□□□□ 0.25
MRPL28-201ENST00000199706 RHOXF2BP0C7M4 288 aa16.61■□□□□ 0.25
MRPL28-201ENST00000199706 CCR10P46092 362 aa16.61■□□□□ 0.25
MRPL28-201ENST00000199706 CYP4F2P78329 520 aa16.61■□□□□ 0.25
MRPL28-201ENST00000199706 CSHL1Q14406 222 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms