RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 SEMA3AQ14563 771 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 POF1BQ8WVV4 589 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 NLE1Q9NVX2 485 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CLDND1Q9NY35 253 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 KCNK6Q9Y257 313 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 A0A0J9YVX5 310 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 MANBAO00462 879 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TPPPO94811 219 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 DIRAS1O95057 198 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 LINGO3P0C6S8 592 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 ZNF865P0CJ78 1059 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CDH15P55291 814 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 RHDQ02161 417 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 UBXN2BQ14CS0 331 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 SUZ12Q15022 739 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 RNASE12Q5GAN4 147 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TMEM135Q86UB9 458 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 OAFQ86UD1 273 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 LAPTM4BQ86VI4 370 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 NPWQ8N729 165 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TRPV3Q8NET8 790 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 OR10H5Q8NGA6 315 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 C1orf21Q9H246 121 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 POLMQ9NP87 494 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 FBXL12Q9NXK8 326 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 MOCS1Q9NZB8 636 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 RIIAD1A6NNX1 92 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 M0QX08 132 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 B3GALT2O43825 422 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 MAFKO60675 156 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 MTRF1O75570 445 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PROZP22891 400 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 FMO3P31513 532 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 AVPR1BP47901 424 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CLDN10P78369 228 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 RING1Q06587 406 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PLET1Q6UQ28 207 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 SUSD1Q6UWL2 747 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 SNX33Q8WV41 574 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 IPCEF1Q8WWN9 437 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 METTL21AQ8WXB1 218 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TMBIM1Q969X1 311 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 DIRAS2Q96HU8 199 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 NECTIN3Q9NQS3 549 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 ADAMTS5Q9UNA0 930 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 FAM240BA0A1B0GVZ2 78 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 HTR3EA5X5Y0 456 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 XKRYO14609 159 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 GNB5O14775 395 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 C9P02748 559 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 CSNK2A2P19784 350 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 MPIP34949 423 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 USP30Q70CQ3 517 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 RNASE11Q8TAA1 199 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 NSUN5Q96P11 429 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 TMEM98Q9Y2Y6 226 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 SLC30A4O14863 429 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 SNX4O95219 450 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 PGLSO95336 258 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 CARTPTQ16568 116 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 RANBP3LQ86VV4 465 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 GJD3Q8N144 294 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 SMPDL3AQ92484 453 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 C11orf24Q96F05 449 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 CEP295NLQ96MC4 621 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 PKP4Q99569 1192 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 GINS4Q9BRT9 223 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 ZDHHC4Q9NPG8 344 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 JUNP05412 331 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 ANXA8P13928 327 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 TCEA1P23193 301 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 DNAJB1P25685 340 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 CLCN4P51793 760 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 RTP2Q5QGT7 225 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 ANO7Q6IWH7 933 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 TMIGD1Q6UXZ0 262 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 DPY19L3Q6ZPD9 716 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 MINDY2Q8NBR6 621 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 DHRS1Q96LJ7 313 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 IL4I1Q96RQ9 567 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 RAB11FIP5Q9BXF6 653 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 SLC29A3Q9BZD2 475 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 MRM3Q9HC36 420 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 ACTR3BQ9P1U1 418 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 BHMG1C9JSJ3 638 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 EBLN1P0CF75 366 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 CSF2RAP15509 400 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 RPL26P61254 145 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 UBAP2Q5T6F2 1119 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 IQCHQ86VS3 1027 aa12.18□□□□□ -0.46
TNFAIP3-206ENST00000612899 JAZF1Q86VZ6 243 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms